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Conserved domains on  [gi|223585802|gb|ACM91753|]
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Cps7H, partial [Streptococcus suis]

Protein Classification

glycosyltransferase( domain architecture ID 11421525)

glycosyltransferase catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
4-74 6.12e-17

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 71.27  E-value: 6.12e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSFTYHNFeKIDESSQSLRVLVSGPAIVTRKMM 74
Cdd:COG0463   74 RNAGLAAARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSR-LIREGESDLRRLGSRLFNLVRLLT 143
 
Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
4-74 6.12e-17

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 71.27  E-value: 6.12e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSFTYHNFeKIDESSQSLRVLVSGPAIVTRKMM 74
Cdd:COG0463   74 RNAGLAAARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSR-LIREGESDLRRLGSRLFNLVRLLT 143
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
4-82 3.62e-14

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 63.18  E-value: 3.62e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223585802    4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSF----TYHNFEKIDESSQSLRVLVSGPAIVTRKMMYNYGY 79
Cdd:pfam00535  70 RNAGLRAATGDYIAFLDADDEVPPDWLEKLVEALEEDGADVvvgsRYVIFGETGEYRRASRITLSRLPFFLGLRLLGLNL 149

                  ...
gi 223585802   80 PGC 82
Cdd:pfam00535 150 PFL 152
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
1-52 1.26e-11

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 56.36  E-value: 1.26e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223585802   1 ALTRNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNN----------GYSFTYHNFEKI 52
Cdd:cd00761   66 AAARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADpeadavggpgNLLFRRELLEEI 127
PRK10073 PRK10073
putative glycosyl transferase; Provisional
4-40 1.76e-03

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 35.02  E-value: 1.76e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNN 40
Cdd:PRK10073  77 RNTGLAVATGKYVAFPDADDVVYPTMYETLMTMALED 113
 
Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
4-74 6.12e-17

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 71.27  E-value: 6.12e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSFTYHNFeKIDESSQSLRVLVSGPAIVTRKMM 74
Cdd:COG0463   74 RNAGLAAARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSR-LIREGESDLRRLGSRLFNLVRLLT 143
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
4-82 3.62e-14

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 63.18  E-value: 3.62e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223585802    4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSF----TYHNFEKIDESSQSLRVLVSGPAIVTRKMMYNYGY 79
Cdd:pfam00535  70 RNAGLRAATGDYIAFLDADDEVPPDWLEKLVEALEEDGADVvvgsRYVIFGETGEYRRASRITLSRLPFFLGLRLLGLNL 149

                  ...
gi 223585802   80 PGC 82
Cdd:pfam00535 150 PFL 152
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
1-52 1.26e-11

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 56.36  E-value: 1.26e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223585802   1 ALTRNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNN----------GYSFTYHNFEKI 52
Cdd:cd00761   66 AAARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADpeadavggpgNLLFRRELLEEI 127
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
5-66 3.02e-08

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 48.31  E-value: 3.02e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 223585802   5 NKALRKARGRWIAFLDSDDLWHPSKLEKQLE-FMKNNGYSFTYHNFEKIDESSQSLRVLVSGP 66
Cdd:cd06433   68 NKGIALATGDIIGFLNSDDTLLPGALLAVVAaFAEHPEVDVVYGDVLLVDENGRVIGRRRPPP 130
GT_2_like_d cd04196
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
3-82 4.44e-08

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133039 [Multi-domain]  Cd Length: 214  Bit Score: 47.63  E-value: 4.44e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223585802   3 TRN--KALRKARGRWIAFLDSDDLWHPSKLEKQLE-FMKNNGYSFTYHNFEKIDESSQSLRV-----LVSGPAIVTRKMM 74
Cdd:cd04196   68 ARNfeSLLQAADGDYVFFCDQDDIWLPDKLERLLKaFLKDDKPLLVYSDLELVDENGNPIGEsffeyQKIKPGTSFNNLL 147

                 ....*...
gi 223585802  75 YNYGYPGC 82
Cdd:cd04196  148 FQNVVTGC 155
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
4-36 8.67e-07

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 44.21  E-value: 8.67e-07
                         10        20        30
                 ....*....|....*....|....*....|...
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEF 36
Cdd:COG1216   73 RNLGLRAAGGDYLLFLDDDTVVEPDWLERLLAA 105
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
4-45 9.62e-07

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 44.35  E-value: 9.62e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSFT 45
Cdd:COG1215  103 LNAGLKAARGDIVVFLDADTVLDPDWLRRLVAAFADPGVGAS 144
GT2_RfbC_Mx_like cd04184
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ...
5-55 1.24e-06

Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133027 [Multi-domain]  Cd Length: 202  Bit Score: 43.73  E-value: 1.24e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 223585802   5 NKALRKARGRWIAFLDSDDLWHPSKL-EKQLEFMKNNGYSFTYHNFEKIDES 55
Cdd:cd04184   76 NSALELATGEFVALLDHDDELAPHALyEVVKALNEHPDADLIYSDEDKIDEG 127
beta3GnTL1_like cd06913
Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of ...
4-35 8.31e-05

Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine ; This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.


Pssm-ID: 133063 [Multi-domain]  Cd Length: 219  Bit Score: 38.98  E-value: 8.31e-05
                         10        20        30
                 ....*....|....*....|....*....|..
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLE 35
Cdd:cd06913   76 KNQAIAQSSGRYLCFLDSDDVMMPQRIRLQYE 107
Glyco_tranf_2_2 pfam10111
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
1-60 1.09e-04

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 313356 [Multi-domain]  Cd Length: 276  Bit Score: 38.80  E-value: 1.09e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223585802    1 ALTRNKALRKARGRWIAFLDSDDLWHPSKLEKQLEF-----MKNN-----GYSFTYHNfekiDESSQSLR 60
Cdd:pfam10111  70 AASRNRGTSHAIGEYISFIDGDCLWSPDKFEKQLKIatslaLQENiqaavVLPVTDLN----DESSNFLR 135
GT2_AmsE_like cd04195
GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a ...
5-41 1.54e-03

GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133038 [Multi-domain]  Cd Length: 201  Bit Score: 35.37  E-value: 1.54e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 223585802   5 NKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNG 41
Cdd:cd04195   73 NEGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEKNP 109
PRK10073 PRK10073
putative glycosyl transferase; Provisional
4-40 1.76e-03

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 35.02  E-value: 1.76e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNN 40
Cdd:PRK10073  77 RNTGLAVATGKYVAFPDADDVVYPTMYETLMTMALED 113
Beta4Glucosyltransferase cd02511
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ...
4-49 3.16e-03

UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.


Pssm-ID: 133005 [Multi-domain]  Cd Length: 229  Bit Score: 34.19  E-value: 3.16e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 223585802   4 RNKALRKARGRWIAFLDSD-----DLWhpSKLEKQLEFMKNNGYSFTYHNF 49
Cdd:cd02511   63 RNFALELATNDWVLSLDADerltpELA--DEILALLATDDYDGYYVPRRNF 111
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
4-44 3.94e-03

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 34.27  E-value: 3.94e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 223585802    4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNNGYSF 44
Cdd:pfam13641  79 LNHGFRAVKSDLVVLHDDDSVLHPGTLKKYVQYFDSPKVGA 119
PRK10018 PRK10018
colanic acid biosynthesis glycosyltransferase WcaA;
4-48 5.36e-03

colanic acid biosynthesis glycosyltransferase WcaA;


Pssm-ID: 182197 [Multi-domain]  Cd Length: 279  Bit Score: 33.81  E-value: 5.36e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKN-NGYSFTYHN 48
Cdd:PRK10018  77 RNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQlVTHAFLYAN 122
GT2_Chondriotin_Pol_N cd06420
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ...
4-40 6.42e-03

N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.


Pssm-ID: 133042 [Multi-domain]  Cd Length: 182  Bit Score: 33.32  E-value: 6.42e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 223585802   4 RNKALRKARGRWIAFLDSDDLWHPSKLEKQLEFMKNN 40
Cdd:cd06420   71 RNKAIAAAKGDYLIFIDGDCIPHPDFIADHIELAEPG 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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