NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|488232054|ref|WP_002303262|]
View 

MULTISPECIES: DUF3781 domain-containing protein [Bacteria]

Protein Classification

DUF3781 domain-containing protein( domain architecture ID 10576892)

DUF3781 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3781 pfam12636
Protein of unknown function (DUF3781); This family of proteins is functionally uncharacterized. ...
 6-77 1.25e-27

Protein of unknown function (DUF3781); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 82 and 98 amino acids in length. There are two conserved sequence motifs: GKNWY and ITA.


:

Pssm-ID: 432686  Cd Length: 72  Bit Score: 94.65  E-value: 1.25e-27
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488232054   6 LENLGRLHTTELGVIRIKKNLSLNVENVIEWCKEKISLSNAEITRKGKNWYITIDNCIITVNAYSYTVITAH 77
Cdd:pfam12636  1 LDIIDKIHTTELGFVRIKKNLGLSDDDVVAWCKAIILDPNAKIERRGKNWYVSAKNIELTVNAHSYTIITAH 72
 
Name Accession Description Interval E-value
DUF3781 pfam12636
Protein of unknown function (DUF3781); This family of proteins is functionally uncharacterized. ...
 6-77 1.25e-27

Protein of unknown function (DUF3781); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 82 and 98 amino acids in length. There are two conserved sequence motifs: GKNWY and ITA.


Pssm-ID: 432686  Cd Length: 72  Bit Score: 94.65  E-value: 1.25e-27
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488232054   6 LENLGRLHTTELGVIRIKKNLSLNVENVIEWCKEKISLSNAEITRKGKNWYITIDNCIITVNAYSYTVITAH 77
Cdd:pfam12636  1 LDIIDKIHTTELGFVRIKKNLGLSDDDVVAWCKAIILDPNAKIERRGKNWYVSAKNIELTVNAHSYTIITAH 72
 
Name Accession Description Interval E-value
DUF3781 pfam12636
Protein of unknown function (DUF3781); This family of proteins is functionally uncharacterized. ...
 6-77 1.25e-27

Protein of unknown function (DUF3781); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 82 and 98 amino acids in length. There are two conserved sequence motifs: GKNWY and ITA.


Pssm-ID: 432686  Cd Length: 72  Bit Score: 94.65  E-value: 1.25e-27
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488232054   6 LENLGRLHTTELGVIRIKKNLSLNVENVIEWCKEKISLSNAEITRKGKNWYITIDNCIITVNAYSYTVITAH 77
Cdd:pfam12636  1 LDIIDKIHTTELGFVRIKKNLGLSDDDVVAWCKAIILDPNAKIERRGKNWYVSAKNIELTVNAHSYTIITAH 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH