MULTISPECIES: small membrane protein YmiC [Lelliottia]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| membrane_YmiC super family | cl49464 | small membrane protein YmiC; YmiC is an uncharacterized predicted protein about 32 amino acids ... |
4-33 | 3.63e-08 | ||
small membrane protein YmiC; YmiC is an uncharacterized predicted protein about 32 amino acids long, hypothesized to be real and a membrane protein based on conservation across multiple gammaproteobacteria with constant length and constant hydrophobic character suggesting insertion into membrane. Expression was verified for a construct with an added C-terminal epitope. Homologs tend to show a pattern of conservative amino acid substitutions. Thus, comparative genomics also suggests YmiC is a real protein. An usual feature is three perfectly invariant Trp residues, and a highly conserved fourth, in a stretch of 19 residues. The actual alignment was detected with superfamily member NF041484: Pssm-ID: 469372 Cd Length: 30 Bit Score: 42.32 E-value: 3.63e-08
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| Name | Accession | Description | Interval | E-value | ||
| membrane_YmiC | NF041484 | small membrane protein YmiC; YmiC is an uncharacterized predicted protein about 32 amino acids ... |
4-33 | 3.63e-08 | ||
small membrane protein YmiC; YmiC is an uncharacterized predicted protein about 32 amino acids long, hypothesized to be real and a membrane protein based on conservation across multiple gammaproteobacteria with constant length and constant hydrophobic character suggesting insertion into membrane. Expression was verified for a construct with an added C-terminal epitope. Homologs tend to show a pattern of conservative amino acid substitutions. Thus, comparative genomics also suggests YmiC is a real protein. An usual feature is three perfectly invariant Trp residues, and a highly conserved fourth, in a stretch of 19 residues. Pssm-ID: 469372 Cd Length: 30 Bit Score: 42.32 E-value: 3.63e-08
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| Name | Accession | Description | Interval | E-value | ||
| membrane_YmiC | NF041484 | small membrane protein YmiC; YmiC is an uncharacterized predicted protein about 32 amino acids ... |
4-33 | 3.63e-08 | ||
small membrane protein YmiC; YmiC is an uncharacterized predicted protein about 32 amino acids long, hypothesized to be real and a membrane protein based on conservation across multiple gammaproteobacteria with constant length and constant hydrophobic character suggesting insertion into membrane. Expression was verified for a construct with an added C-terminal epitope. Homologs tend to show a pattern of conservative amino acid substitutions. Thus, comparative genomics also suggests YmiC is a real protein. An usual feature is three perfectly invariant Trp residues, and a highly conserved fourth, in a stretch of 19 residues. Pssm-ID: 469372 Cd Length: 30 Bit Score: 42.32 E-value: 3.63e-08
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