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Conserved domains on  [gi|1939649768|ref|WP_196588568|]
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MULTISPECIES: DUF3703 domain-containing protein [Pseudomonadota]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3703 super family cl13868
Protein of unknown function (DUF3703); This family of proteins is found in bacteria. Proteins ...
 43-89 1.56e-03

Protein of unknown function (DUF3703); This family of proteins is found in bacteria. Proteins in this family are typically between 113 and 135 amino acids in length.


The actual alignment was detected with superfamily member pfam12487:

Pssm-ID: 432589  Cd Length: 109  Bit Score: 35.26  E-value: 1.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1939649768  43 AKRSRVAWRAHESGRVVAHCYLGLHLhlRSHAAMLGLAWRTRKVAEI 89
Cdd:pfam12487  20 AGDLQAAWTHLERAHILGQRDPYLHT--RVHWAMLRFALRQRDGREV 64
 
Name Accession Description Interval E-value
DUF3703 pfam12487
Protein of unknown function (DUF3703); This family of proteins is found in bacteria. Proteins ...
 43-89 1.56e-03

Protein of unknown function (DUF3703); This family of proteins is found in bacteria. Proteins in this family are typically between 113 and 135 amino acids in length.


Pssm-ID: 432589  Cd Length: 109  Bit Score: 35.26  E-value: 1.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1939649768  43 AKRSRVAWRAHESGRVVAHCYLGLHLhlRSHAAMLGLAWRTRKVAEI 89
Cdd:pfam12487  20 AGDLQAAWTHLERAHILGQRDPYLHT--RVHWAMLRFALRQRDGREV 64
 
Name Accession Description Interval E-value
DUF3703 pfam12487
Protein of unknown function (DUF3703); This family of proteins is found in bacteria. Proteins ...
 43-89 1.56e-03

Protein of unknown function (DUF3703); This family of proteins is found in bacteria. Proteins in this family are typically between 113 and 135 amino acids in length.


Pssm-ID: 432589  Cd Length: 109  Bit Score: 35.26  E-value: 1.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1939649768  43 AKRSRVAWRAHESGRVVAHCYLGLHLhlRSHAAMLGLAWRTRKVAEI 89
Cdd:pfam12487  20 AGDLQAAWTHLERAHILGQRDPYLHT--RVHWAMLRFALRQRDGREV 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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