7PBM: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]

PDB ID: 7PBMDownload
MMDB ID: 220193
PDB Deposition Date: 2021/8/2
Updated in MMDB: 2022/12
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Salmonella enterica subsp. enterica serovar Typhimurium▼
Similar Structures:
Biological Unit for 7PBM: decameric; determined by author and by software (PISA)
Molecular Components in 7PBM
Label Count Molecule
Proteins (8 molecules)
6
Holliday Junction Atp-dependent DNA Helicase Ruvb
Molecule annotation
1
Holliday Junction Atp-dependent DNA Helicase Ruva
Molecule annotation
1
Holliday Junction Atp-dependent DNA Helicase Ruva
Molecule annotation
Nucleotides(2 molecules)
1
Random DNA
Molecule annotation
1
Random DNA
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
3
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER (Link to PubChem not yet available)PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2
3
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
3
3
ADENOSINE-5'-DIPHOSPHATE (Link to PubChem not yet available)ADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303