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Taxonomy browser (Ciceribacter naphthalenivorans)

Ciceribacter naphthalenivorans

Taxonomy ID: 1118451 (for references in articles please use NCBI:txid1118451)
current name
Ciceribacter naphthalenivorans (Kaiya et al. 2018) Rahi et al. 2021 in [Rahi P et al. (2021), Validation List No. 202 (2021)]
basionym:
Rhizobium naphthalenivorans Kaiya et al. 2018 in [Validation List No. 180 (2018)]
type strain of Rhizobium naphthalenivorans: personal::TSY03b, NBRC:107585, KCTC:23252
homotypic synonym:
"Rhizobium naphthalenivorans" Kaiya et al. 2012, effective name 1) in [Kaiya S et al. (2012)]
"Paenirhizobium naphthalenivorans" (Kaiya et al. 2018) Ma et al. 2023, effective name 2) in [Ma T et al. (2023)]
includes:
Rhizobium sp. TSW01
Rhizobium sp. TSY03b
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Ciceribacter
   Entrez records   
Database name Direct links Links from type
Nucleotide 466 449
Protein 10,613 -
Genome 1 -
Popset 6 -
PubMed Central 4 -
SRA Experiments 3 -
Identical Protein Groups 5,741 -
BioProject 5 -
BioSample 8 3
Assembly 4 -
Taxonomy 1 -

Notes:

Comments and References:
Rahi P et al. (2021), PubMed: abstract
Rahi, P., Khairnar, M., Hagir, A., Narayan, A., Jain, K.R., Madamwar, D., Pansare, A., and Shouche, Y. "Peteryoungia gen. nov. with four new species combinations and description of Peteryoungia desertarenae sp. nov., and taxonomic revision of the genus Ciceribacter based on phylogenomics of Rhizobiaceae." Arch. Microbiol. (2021) 203(6):3591-3604.
Validation List No. 202 (2021), PubMed: abstract
Validation List No. 202. "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2021) 71(11):005096.
Validation List No. 180 (2018), PubMed: abstract
Validation List No. 180: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68(3):693-694.
Kaiya S et al. (2012), PubMed: abstract
Kaiya, S., Rubaba, O., Yoshida, N., Yamada, T., and Hiraishi, A. "Characterization of Rhizobium naphthalenivorans sp. nov. with special emphasis on aromatic compound degradation and multilocus sequence analysis of housekeeping genes." J. Gen. Appl. Microbiol. 58(3):211-224.
Ma T et al. (2023), doi: 10.3389/fmicb.2023.1207256
Ma, T., Xue, H., Piao, C., Jiang, N., and Li, Y. "Phylogenomic reappraisal of the family Rhizobiaceae at the genus and species levels, including the description of Ectorhizobium quercum gen. nov., sp. nov." Front. Microbiol. (2023) 14:1207256.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
2996846327: Ciceribacter naphthalenivorans NBRC 107585 organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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