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Taxonomy browser (Ligilactobacillus ruminis)

Ligilactobacillus ruminis

Taxonomy ID: 1623 (for references in articles please use NCBI:txid1623)
current name
Ligilactobacillus ruminis (Sharpe et al. 1973) Zheng et al. 2020 in [Zheng J et al. (2020)]
basionym:
Lactobacillus ruminis Sharpe et al. 1973
type strain of Lactobacillus ruminis: ATCC:27780, CCUG:39465, CIP:103153, DSM:20403, JCM:1152, BCCM/LMG:10756, NBRC:102161, NRRL:B-14853
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 8,792 6,549 880
Protein 69,551 51,675 -
Genome 2 1 -
Popset 14 14 -
GEO Datasets 6 2 -
PubMed Central 402 402 -
Gene 6,675 1 -
SRA Experiments 138 134 -
Protein Clusters 1,801 1,801 -
Identical Protein Groups 49,213 44,461 -
BioProject 143 133 -
BioSample 462 451 5
Assembly 119 106 -
Taxonomy 8 1 -

Comments and References:

Zheng J et al. (2020), PubMed: abstract
Zheng, J., Wittouck, S., Salvetti, E., Franz, C.M.A.P., Harris, H.M.B., Mattarelli, P., O'Toole, P.W., Pot, B., Vandamme, P., Walter, J., Watanabe, K., Wuyts, S., Felis, G.E., Gänzle, M.G., and Lebeer, S. "A taxonomic note on the genus description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae." Int. J. Syst. Evol. Microbiol. (2020) 70(4):2782-2858.
Sharpe ME et al. (1973)
Sharpe, M.E., Latham, M.J., Garvie, E.I., Zirngibl, J., and Kandler, O. "Two new species of Lactobacillus isolated from the bovine rumen, Lactobacillus ruminus sp. nov. and Lactobacillus vitulinus sp. nov." J. Gen. Microbiol. (1973) 77:37-49. [No abstract available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ligilactobacillus ruminis meta-databases BacDive
Lactobacillus ruminis Sharpe et al. 1973 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lactobacillus ruminis culture/stock collections Global Catalogue of Microorganisms
34 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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