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Taxonomy browser (Candidatus Thermoplasmatota)

Candidatus Thermoplasmatota

Taxonomy ID: 2283796 (for references in articles please use NCBI:txid2283796)
current name
Candidatus Thermoplasmatota
includes:
Diaforarchaea Petijean et al. 2015
equivalent:
"Candidatus Thermoplasmatota" Rinke et al. 2019, candidatus name 1) in [Rinke C et al. (2019)]
vernacular name:
Diaforarchaea group
NCBI BLAST name: archaea
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Archaea
   Entrez records   
Database name Subtree links Direct links
Nucleotide 212,420 -
Protein 414,619 -
Structure 241 -
Genome 413 -
Popset 162 143
Conserved Domains 49 5
GEO Datasets 66 -
PubMed Central 4,238 23
Gene 42,046 -
SRA Experiments 2,176 3
Identical Protein Groups 1,734,300 -
BioProject 229 1
BioSample 11,207 3
Assembly 4,454 -
PubChem BioAssay 2 -
Taxonomy 809 1

Notes:

Comments and References:

Rinke C et al. (2019), doi: 10.1038/s41396-018-0282-y, PubMed: abstract
Rinke, C., Rubino, F., Messer, L.F., Youssef, N., Parks, D.H., Chuvochina, M., Brown, M., Jeffries, T., Tyson, G.W., Seymour, J.R., and Hugenholtz, P. "A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.)." ISME J. (2019) 13(3):663-675.
Petitjean C et al. (2015b)
Petitjean, C., Deschamps, P., Lopez-Garcia, P., Moreira, D., and Brochier-Armanet, C. "Extending the conserved phylogenetic core of archaea disentangles the evolution of the third domain of life." Mol. Biol. Evol. (2015) 32:1242-1254. [N.B.: the authors propose two taxa within the phylum Euryarchaeota with rank "superclass": 'Methanomada' and 'Diaforarchaea'. However, the International Code of Nomenclature of Prokaryotes does not recognize the rank of superclass, and does not permit any taxa below the rank of phylum that begin with the prefix "super".]

External Information Resources (NCBI LinkOut)

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OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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