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Taxonomy browser (Burkholderia gladioli)

Burkholderia gladioli

Taxonomy ID: 28095 (for references in articles please use NCBI:txid28095)
current name
Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993
basionym:
Pseudomonas gladioli Severini 1913 (Approved Lists 1980), nom. approb. 1)
type strain of Pseudomonas gladioli: ATCC:10248, CCUG:1782, CFBP:2427, CIP:105410, DSM:4285, HAMBI:2157, ICMP:3950, IFO:13700, JCM:9311, BCCM/LMG:2216, NBRC:13700, NCCB:38018, NCPPB:1891, NCTC:12378, NRRL:B-793
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Pseudomonas antimicrobica Attafuah and Bradbury 1990
type strain of Pseudomonas antimicrobica: BCCM/LMG:18920, NCIMB:9898
heterotypic synonym
Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995
basionym:
Pseudomonas cocovenenans van Damme et al. 1960 (Approved Lists 1980), nom. approb. 2)
type strain of Pseudomonas cocovenenans: ATCC:33664, DSM:11318, BCCM/LMG:11626
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 61,023 58,081 496
Protein 531,696 502,566 -
Structure 7 2 -
Genome 1 1 -
Popset 86 80 -
GEO Datasets 6 6 -
PubMed Central 740 740 -
Gene 37,703 29,945 -
SRA Experiments 313 305 -
Protein Clusters 5,016 5,016 -
Identical Protein Groups 373,344 372,302 -
BioProject 69 57 -
BioSample 592 579 9
Assembly 315 307 -
PubChem BioAssay 2 2 -
Taxonomy 8 1 -

Notes:

Comments and References:

Anzai Y et al. (2000)
Anzai, Y., Kim, H., Park, J.Y., Wakabayashi, H., and Oyaizu, H. "Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence." Int. J. Syst. Evol. Microbiol. (2000) 50:1563-1589.
Attafuah A & Bradbury JF (1989)
Attafuah, A., and Bradbury, J.F. "Pseudomonas antimicrobica, a new species strongly antagonistic to plant pathogenes." J. Appl. Bacteriol. (1989) 67:567-573. [No PubMed record available.] [N.B.: article is not available on the journal's web site.]
Coenye T et al. (1999)
Coenye, T., Holmes, B., Kersters, K., Govan, J.R., and Vandamme, P. "Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995 and Burkholderia vandii Urakami et al. 1994 are junior synonyms of Burkholderia gladioli (Severini 1913) Yabuuchi etal. 1993 and Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994, respectively." Int. J. Syst. Bacteriol. (1999) 49:37-42.
Coenye T et al. (2000)
Coenye, T., Gillis, M., and Vandamme, P. "Pseudomonas antimicrobica Attafuah and Bradbury 1990 is a junior synonym of Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993." Int. J. Syst. Evol. Microbiol. (2000) 50:2135-2139.
Maeda Y et al. (2006)
Maeda, Y., Shinohara, S., Kiba, A., Ohnishi, K., Furuya, N., Kawamura, Y., Ezaki, T., Vandamme, P.A.R., Tsushima, S., and Hikichi, Y. "Phylogenetic study and multiplex PCR-based detection of Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli using gyrB and rpoD sequences." Int. J. Syst. Evol. Microbiol. (2006) 56:1031-1038. Published online 31 December 2005. doi:10.1099/ijs.0.64184-0
Severini G (1913)
Severini, G. "Una bacteriosi dell' Ixia maculata e del Gladiolus colvilli." Annali di Botanica (Roma) (1913) 11:413-424. [No PubMed record available.]
Skerman VBD et al. (1980) (Pseudomonas cocovenenans)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Skerman VBD et al. (1980) (Pseudomonas gladioli)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
VALIDATION LIST No. 34 (1990) (Pseudomonas antimicrobica)
VALIDATION LIST No. 34. Int. J. Syst. Bacteriol. (1990) 40:320-321.
VALIDATION LIST No. 45 (1993)
VALIDATION LIST No. 45. Int. J. Syst. Bacteriol. (1993) 43:398-399.
van Damme PA et al. (1960)
van Damme, P.A., Johannes, A.G., Cox, H.C., and Berends, W. "On toxoflavin, the yellow poison of Pseudomonas cocovenenans." Rec. Trav. Chim. Pays-Bas (1960) 79:255-267. [No PubMed record available.]
Yabuuchi E et al. (1992)
Yabuuchi, E., Kosako, Y., Oyaizu, H., Yano, I., Hotta, H., Hashimoto, Y., Ezaki, T., and Arakawa, M. "Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov." Microbiol. Immunol. (1992) 36:1251-1275. [Erratum: Microbiol. Immunol. (1993) 37:335.]
Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]
Zhao N et al. (1995)
Zhao, N., Qu, C., Wang, E., and Chen, W. "Phylogenetic evidence for the transfer of Pseudomonas cocovenenans (van Damme et al. 1960) to the genus Burkholderia as Burkholderia cocovenenans (van Damme et al. 1960) comb. nov." Int. J. Syst. Bacteriol. (1995) 45:600-603.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Burkholderia gladioli meta-databases BacDive
4 records from this provider organism-specific BioCyc
Burkholderia cocovenenans (van Damme et al. 1960) Zhao et al., 1995 taxonomy/phylogenetic Encyclopedia of life
6 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Burkholderia gladioli culture/stock collections Global Catalogue of Microorganisms
16 records from this provider organism-specific Integrated Microbial Genomes
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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