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Taxonomy browser (Bradyrhizobium)

Bradyrhizobium

Taxonomy ID: 374 (for references in articles please use NCBI:txid374)
current name
Bradyrhizobium Jordan 1982
NCBI BLAST name: a-proteobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Agromonas Ohta and Hattori 1985
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 287,894 14
Protein 6,352,968 261,821
Structure 146 1
Genome 83 1
Popset 1,679 951
Conserved Domains 1 1
GEO Datasets 634 2
PubMed Central 8,339 8,070
Gene 222,795 -
SRA Experiments 1,914 15
GEO Profiles 94,840 -
Protein Clusters 14,415 6,983
Identical Protein Groups 4,369,793 261,786
BioProject 729 28
BioSample 2,396 25
Assembly 1,370 -
PubChem BioAssay 8 -
Taxonomy 9,335 1

Comments and References:

Bradyrhizobium (LPSN link)
Agromonas (LPSN link)
Abaidoo RC et al. (2000)
Abaidoo, R.C., Keyser, H.H., Singleton, P.W., and Borthakur, D. "Bradyrhizobium spp. (TGx) isolates nodulating the new soybean cultivars in Africa are diverse and distinct from bradyrhizobia that nodulate North American soybeans." Int. J. Syst. Evol. Microbiol. (2000) 50:225-234.
Barrera LL et al. (1997)
Barrera, L.L., Trujillo, M.E., Goodfellow, M., Garcia, F.J., Hernandez-Lucas, I., Davila, G., van Berkum, P., and Martinez-Romero, E. "Biodiversity of bradyrhizobia nodulating Lupinus spp." Int. J. Syst. Bacteriol. (1997) 47:1086-1091.
Gaunt MW et al. (2001)
Gaunt, M.W., Turner, S.L., Rigottier-Gois, L., Lloyd-Macgilp, S.A., and Young, J.P. "Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia." Int. J. Syst. Evol. Microbiol. (2001) 51:2037-2048.
Jordan DC (1982)
Jordan, D.C. "Transfer of Rhizobium japonicum Buchanan 1980 to Bradyrhizobium gen. nov., a genus of slow-growing, root nodule bacteria from leguminous plants." Int. J. Syst. Bacteriol. (1982) 32:136-139. [No PubMed record available.]
Ohta H & Hattori T (1983)
Ohta, H., and Hattori, T. "Agromonas oligotrophica gen. nov., sp. nov., a nitrogen-fixing oligotrophic bacterium." Antonie van Leeuwenhoek J. Microbiol. Serol. (1983) 49:429-446.
Parker MA & Lunk A (2000)
Parker, M.A., and Lunk, A. "Relationships of bradyrhizobia from Platypodium and Machaerium (Papilionoideae: tribe Dalbergieae) on Barro Colorado Island, Panama." Int. J. Syst. Evol. Microbiol. (2000) 50:1179-1186.
So RB et al. (1994)
So, R.B., Ladha, J.K., and Young, J.P. "Photosynthetic symbionts of Aeschynomene spp. form a cluster with bradyrhizobia on the basis of fatty acid and rRNA analyses." Int. J. Syst. Bacteriol. (1994) 44:392-403.
Tighe SW et al. (2000)
Tighe, S.W., de Lajudie, P., Dipietro, K., Lindstrom, K., Nick, G., and Jarvis, B.D. "Analysis of cellular fatty acids and phenotypic relationships of Agrobacterium, Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium species using the Sherlock Microbial Identification System." Int. J. Syst. Evol. Microbiol. (2000) 50:787-801.
VALIDATION LIST No. 17 (1985) (Agromonas)
VALIDATION LIST No. 17. Int. J. Syst. Bacteriol. (1985) 35:223-225.
van Berkum P & Fuhrmann JJ (2000)
van Berkum, P., and Fuhrmann, J.J. "Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence." Int. J. Syst. Evol. Microbiol. (2000) 50:2165-2172.
Willems A & Collins MD (1993)
Willems, A., and Collins, M.D. "Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequences." Int. J. Syst. Bacteriol. (1993) 43:305-313.
Willems A et al. (2001)
Willems, A., Coopman, R., and Gillis, M. "Phylogenetic and DNA-DNA hybridization analyses of Bradyrhizobium species." Int. J. Syst. Evol. Microbiol. (2001) 51:111-117.
Willems A et al. (2001b)
Willems, A., Coopman, R., and Gillis, M. "Comparison of sequence analysis of 16S-23S rDNA spacer regions, AFLP analysis and DNA-DNA hybridizations in Bradyrhizobium." Int. J. Syst. Evol. Microbiol. (2001) 51:623-632.
Willems A et al. (2001c)
Willems, A., Doignon-Bourcier, F., Goris, J., Coopman, R., de Lajudie, P., De Vos, P., and Gillis, M. "DNA-DNA hybridization study of Bradyrhizobium strains." Int. J. Syst. Evol. Microbiol. (2001) 51:1315-1322.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bradyrhizobium taxonomy/phylogenetic Encyclopedia of life
27 records from this provider organism-specific Integrated Microbial Genomes
Bradyrhizobium taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Bradyrhizobium Jordan, 1982 taxonomy/phylogenetic Ocean Biogeographic Information System
Bradyrhizobium Jordan, 1982 taxonomy/phylogenetic World Register of Marine Species
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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