Taxonomy browser (Paraburkholderia sediminicola)

Paraburkholderia sediminicola (Lim et al. 2008) Sawana et al. 2015 emend. Vanwijnsberghe et al. 2021, emended name¹⁾ in [Vanwijnsberghe S et al. (2021)]

NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia

Entrez records
Database name	Direct links	Links from type
Nucleotide	530	323
Protein	27,792	-
Genome	1	-
Popset	9	-
PubMed Central	10	-
Gene	1	-
SRA Experiments	9	-
Identical Protein Groups	31,483	-
BioProject	9	-
BioSample	8	3
Assembly	4	-
Taxonomy	1	-

Notes:

1) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Vanwijnsberghe S et al. (2021), doi: 10.3390/ijms22137003, PubMed: abstract

Vanwijnsberghe, S., Peeters, C., De Ridder, E., Dumolin, C., Wieme, A.D., Boon, N., and Vandamme, P. "Genomic aromatic compound degradation potential of novel Paraburkholderia species: Paraburkholderia domus sp. nov., Paraburkholderia haematera sp. nov. and Paraburkholderia nemoris sp. nov." Int. J. Mol. Sci. (2021) 22(13):7003.

Lim JH et al. (2008)

Lim, J.H., Baek, S.-H., and Lee, S.-T. "Burkholderia sediminicola sp. nov., isolated from freshwater sediment." Int. J. Syst. Evol. Microbiol. (2008) 58:565-569.

Sawana A et al. (2014)

Sawana, A., Adeolu, M., and Gupta, R.S. "Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species." Front. Genet. (2014) 5:429.

VALIDATION LIST No. 165 (2015)

Validation List No. 165: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2015) 65:2777-2783.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Paraburkholderia sediminicola	meta-databases	BacDive
3 records from this provider	organism-specific	Genomes On Line Database
Burkholderia sediminicola	culture/stock collections	Global Catalogue of Microorganisms
6 records from provider	organism-specific	Integrated Microbial Genomes

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here

strain
134_6D_8.2_Bac1 [1]	8.7 [1]	ALPN47 [1]	APC15 [1 1]
AR 20-22 [1]	AR 20-75 [1]	AR20-17 [1]	Aca-21 [1 1]
B31 [1]	BJC15-D11 [1]	BRUESC241 [1]	C06 [1]
CBEE*2 [1]	DP-P12 [1 2]	E0_12 [1 1]	E0_2 [1 1]
E0_22 [1 1]	E0_25 [1 1]	E0_30 [1 1]	E0_31 [1 1]
E0_4 [1 1]	E0_40 [1 1]	E0_41 [1 1]	E0_44 [1 1]
E0_45 [1 1]	E1BF6_5 [1 1]	E3B3_1 [1 1]	E3B3_11 [1 1]
E3B3_3 [1 1]	E3B3_4 [1 1]	E3B3_9 [1 1]	E3BF6_5 [1 1]
E3BF7_4 [1 1]	E3BF9_3 [1 1]	E3BF9_6 [1 1]	ES_FE-E3 [1 1 2]
ES_PA-E8 [1 1 1]	ES_PA-E9 [1 1 2]	ES_PA-F4 [1 1 3]	F15 [1]
GB2 [1]	GB6 [1]	GL18 [1]	GM297 [1]
GM519 [1]	HU2-65W [1 8 31483 530 9 1 9]	IJ_1_B1 [1]	IJ_2_B1 [1]
K0126413001 [1]	LMG 24238 [1 2 318 14352]	LNW13 [1 1]	Mirt02B [1]
N1012 [1]	N1013 [1]	N1014 [1]	PRB109 [1 1]
PRB189 [1 1]	PRB200 [1 1]	PRB241 [1 1]	PSB001 [1 1]
PSB002 [1 1]	PSB004 [1 1]	PSB005 [1 1]	PSB006 [1 1]
PSB007 [1 1]	PSB008 [1 1]	PSB009 [1 1]	PSB023 [1 1]
PSB024 [1 1]	PSB025 [1 1]	PSB026 [1 1]	PSB027 [1 1]
PSB029 [1 1]	PSB033 [1 1]	PSB034 [1 1]	PSB035 [1 1]
PSB036 [1 1]	PSB037 [1 1]	PSB040 [1 1]	PSB043 [1 1]
PSB044 [1 1]	PSB050 [1 1]	PSB051 [1 1]	PSB052 [1 1]
PSB061 [1 1]	PSB064 [1 1]	PSB066 [1 1]	PSB067 [1 1]
PSB068 [1 1]	PSB069 [1 1]	PSB070 [1 1]	PSB072 [1 1]
PSB074 [1 1]	PSB075 [1 1]	PSB076 [1 1]	PSB077 [1 1]
PSB089 [1 1]	PSB090 [1 1]	PSB091 [1 1]	PSB093 [1 1]
PSB094 [1 1]	PSB095 [1 1]	PSB097 [1 1]	PSB099 [1 1]
PSB100 [1 1]	PSB102 [1 1]	PSB103 [1 1]	PSB104 [1 1]
PSB105 [1 1]	PSB111 [1 1]	PSB113 [1 1]	PSB114 [1 1]
PSB117 [1 1]	PSB123 [1 1]	PSB125 [1 1]	PSB126 [1 1]
PSB127 [1 1]	PSB143 [1 1]	PSB144 [1 1]	PSB146 [1 1]
PSB149 [1 1]	PSB150 [1 1]	PSB151 [1 1]	PSB152 [1 1]
PSB153 [1 1]	PSB154 [1 1]	PSB159 [1 1]	PSB178 [1 1]
PSB180 [1 1]	PSB182 [1 1]	PSB183 [1 1]	PSB184 [1 1]
PSB186 [1 1]	PSB187 [1 1]	PSB188 [1 1]	PSB190 [1 1]
PSB192 [1 1]	PSB193 [1 1]	PSB196 [1 1]	PSB198 [1 1]
PSB201 [1 1]	PSB202 [1 1]	PSB204 [1 1]	PSB212 [1 1]
PSB216 [1 1]	PSB217 [1 1]	PSB223 [1 1]	PSB224 [1 1]
PSB225 [1 1]	PSB226 [1 1]	PSB228 [1 1]	PSB230 [1 1]
PSB232 [1 1]	PSB233 [1 1]	PSB236 [1 1]	PSB237 [1 1]
PSB238 [1 1]	PSB240 [1 1]	PSB251 [1 1]	PSB252 [1 1]
PSB253 [1 1]	PSB255 [1 1]	PSB258 [1 1]	PSB259 [1 1]
PSB260 [1 1]	PSB261 [1 1]	PSB265 [1 1]	PSB266 [1 1]
PSB267 [1 1]	PSB271 [1 1]	PSB272 [1 1]	PSB275 [1 1]
PSB276 [1 1]	PSB281 [1 1]	PSB282 [1 1]	PSB283 [1 1]
PSB289 [1 1]	PSB291 [1 1]	PSB292 [1 1]	PSB298 [1 1]
PSB299 [1 1]	PSB300 [1 1]	PSB321 [1 1]	PSB323 [1 1]
PSB326 [1 1]	PSB329 [1 1]	PSB334 [1 1]	PSB337 [1 1]
PSB339 [1 1]	PSB340 [1 1]	R.B5R1 [1 1]	R.B5R2 [1 1]
R.B5R3 [1 1]	R.M1R10 [1 1]	R.M1R13 [1 1]	R.M1R3 [1 1]
R.M1R4 [1 1]	R.M2R9 [1 1]	R12 [1]	R19.2.2 [1]
R37 [1]	R7.2.2 [1]	R83039 [1]	S3.4.2 [1]
S636 [1 1]	VMSES36 [1]	WS-L26 [1]	XS23 [1]
XS25 [1]	YH0126412003 [1]	ZM3 [1]
isolate
224-45B [1]	36 [1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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