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Taxonomy browser (Xanthomonas fragariae)

Xanthomonas fragariae

Taxonomy ID: 48664 (for references in articles please use NCBI:txid48664)
current name
Xanthomonas fragariae Kennedy and King 1962 emend. van den Mooter and Swings 1990
type strain of Xanthomonas fragariae: ATCC:33239, CFBP:2157, CCUG:23372, DSM:3587, ICMP:5715, BCCM/LMG:708, NCPPB:1469, VKM:B-2165, personal::PD 885
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 44,408 44,214 666
Protein 57,553 53,767 -
Genome 1 1 -
Popset 24 24 -
PubMed Central 102 102 -
Gene 12,405 12,405 -
SRA Experiments 88 87 -
Protein Clusters 2,395 2,395 -
Identical Protein Groups 29,415 28,890 -
BioProject 17 16 -
BioSample 98 96 4
Assembly 82 81 -
Taxonomy 2 1 -

Comments and References:

Kennedy BW & King TH (1962)
Kennedy, B.W., and King, T.H. "Angular leaf spot of strawberry caused by Xanthomonas frageriae sp. nov." Phytopathology (1962) 52:873-875. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Van den Mooter M & Swings J (1990)
Van den Mooter, M., and Swings, J. "Numerical analysis of 295 phenotypic features of 266 Xanthomonas strains and related strains and an improved taxonomy of the genus." Int. J. Syst. Bacteriol. (1990) 40:348-369.
Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas fragariae meta-databases BacDive
Xanthomonas fragariae Kennedy and King 1962 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Xanthomonas fragariae culture/stock collections Global Catalogue of Microorganisms
58 records from this provider organism-specific Integrated Microbial Genomes
Xanthomonas fragariae taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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