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Taxonomy browser (Piscinibacter sakaiensis)

Piscinibacter sakaiensis

Taxonomy ID: 1547922 (for references in articles please use NCBI:txid1547922)
current name
Piscinibacter sakaiensis (Tanasupawat et al. 2016) Liu et al. 2023 in [Validation List No. 209 (2023)]
homotypic synonym:
"Piscinibacter sakaiensis" (Tanasupawat et al. 2016) Liu et al. 2022, effective name in [Liu Y et al. (2022b)]
basionym:
Ideonella sakaiensis Tanasupawat et al. 2016
type strain of Ideonella sakaiensis: personal::201-F6, NBRC:110686, TISTR:2288, NCTC:14201
includes:
Ideonella sp. 201-F6
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Sphaerotilaceae; Piscinibacter
   Entrez records   
Database name Direct links Links from type
Nucleotide 460 458
Protein 11,112 -
Structure 57 -
Genome 1 -
GEO Datasets 5 -
PubMed Central 287 -
SRA Experiments 3 -
Identical Protein Groups 6,961 -
BioProject 3 -
BioSample 5 5
Assembly 1 -
Taxonomy 1 -

Comments and References:
Validation List No. 209 (2023), PubMed: abstract
Validation List no. 209: "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(1):005709.
Liu Y et al. (2022b), PubMed: abstract
Liu, Y., Du, J., Pei, T., Du, H., Feng, G.-D., and Zhu, H. "Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family of Sphaerotilaceae fam. nov. and taxonomic revisions." Syst. Appl. Microbiol. (2022) 45(6):126352.
Tanasupawat S et al. (2016c)
Tanasupawat, S., Takehana, T., Yoshida, S., Hiraga, K., and Oda, K. "Ideonella sakaiensis sp. nov., isolated from a microbial consortium that degrades poly(ethylene terephthalate)." Int. J. Syst. Evol. Microbiol. (2016) 66:2813-2818.
Yang Y et al. (2016)
Yang, Y., Yang, J., and Jiang, L. "Comment on 'A bacterium that degrades and assimilates poly(ethylene terephthalate)'." Science (2016) 353:759.
Yoshida S et al. (2016)
Yoshida, S., Hiraga, K., Takehana, T., Taniguchi, I., Yamaji, H., Maeda, Y., Toyohara, K., Miyamoto, K., Kimura, Y., and Oda, K. "A bacterium that degrades and assimilates poly(ethylene terephthalate)." Science (2016) 351:1196-1199.
Yoshida S et al. (2016b)
Yoshida, S., Hiraga, K., Takehana, T., Taniguchi, I., Yamaji, H., Maeda, Y., Toyohara, K., Miyamoto, K., Kimura, Y., and Oda, K. "Response to Comment on "'A bacterium that degrades and assimilates poly(ethylene terephthalate)'." Science (2016) 353:759.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ideonella sakaiensis meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0138370 organism-specific Genomes On Line Database
2681813438: Ideonella sp. 201-F6 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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