Taxonomy browser (Paraburkholderia acidicola)

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Taxonomy browser (Paraburkholderia acidicola)

Paraburkholderia acidicola

Taxonomy ID: 1912599 (for references in articles please use NCBI:txid1912599)

current name

Paraburkholderia acidicola Rudra and Gupta 2021 in [Rudra B & Gupta RS (2021)]

type strain of Paraburkholderia acidicola: personal::G-6302, ATCC :31363, IFO :13774, FERM-P No. 4344

homotypic synonym:

"Pseudomonas acidophila" Imada et al. 1980, effective name¹⁾

"Paraburkholderia acidophila" (Imada et al. 1980) Horsman et al. 2017, effective name, nom. illeg.^2),3)

NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia

Entrez records
Database name	Direct links	Links from type
Nucleotide	32	31
Protein	11,931	-
Genome	1	-
PubMed Central	26	-
SRA Experiments	1	-
Identical Protein Groups	6,992	-
BioProject	1	-
BioSample	3	1
Assembly	1	-
Taxonomy	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) 'Nom. illeg.' (= nomen illegitimum, = illegitimate name) refers to a validly published name that is not in accordance with the particular rules of its relevant Code of Nomenclature.

Comments and References:

Rudra B & Gupta RS (2021), PubMed: abstract

Rudra, B., and Gupta, R.S. "Phylogenomic and comparative genomic analyses of species of the family Pseudomonadaceae: Proposals for the genera Halopseudomonas gen. nov. and Atopomonas gen. nov., merger of the genus Oblitimonas with the genus Thiopseudomonas, and transfer of some misclassified species of the genus Pseudomonas into other genera." Int. J. Syst. Evol. Microbiol. (2021) 71(9):005011.

Horsman ME et al. (2017), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653948/

Horsman, M.E., Marous, D.R., Li, R., Oliver, R.A., Byun, B., Emrich, S.J., Boggess, B., Townsend, C.A., and Mobashery, S. "Whole-genome shotgun sequencing of two β-Proteobacterial species in search of the bulgecin biosynthetic cluster." (2017) ACS Chem. Biol. (2017) 12(10):2552-2557.

Imada A et al. (1980)

Imada, A., Kitano, K.., and Asai, M. "Antibiotic G-6302." US Patent 4,229,436 dated Oct. 21 1980.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
2 records from this provider	organism-specific	BioCyc
2956909913: Paraburkholderia acidicola ATCC 31363	organism-specific	Integrated Microbial Genomes
Pseudomonas acidophila	taxonomy/phylogenetic	Lifemap

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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