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Taxonomy browser (Halopseudomonas phragmitis)

Halopseudomonas phragmitis

Taxonomy ID: 1931241 (for references in articles please use NCBI:txid1931241)
current name
Halopseudomonas phragmitis (Li et al. 2020) Lalucat et al. 2022 in [Lalucat J et al. (2022), Validation List No. 204 (2022)]
basionym:
Pseudomonas phragmitis Li et al. 2020 in [Li J et al. (2020)]
type strain of Pseudomonas phragmitis: personal::S-6-2, KCTC:52539, CGMCC:1.15798
homotypic synonym:
"Neopseudomonas phragmitis" (Li et al. 2020) Saati-Santamaría et al. 2021, effective name, nom. illeg. 1),2) in [Saati-Santamaría Z et al. (2021)]
includes:
Pseudomonas sp. S-6-2
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Halopseudomonas
   Entrez records   
Database name Direct links Links from type
Nucleotide 31 7
Protein 5,973 -
Genome 1 -
Popset 4 -
PubMed Central 3 -
Identical Protein Groups 4,055 -
BioProject 2 -
BioSample 1 1
Assembly 1 -
Taxonomy 1 -

Notes:

Comments and References:
Lalucat J et al. (2022), PubMed: abstract
Lalucat, J., Gomila, M., Mulet, M., Zaruma, A., and García-Valdés, E. "Past, present and future of the boundaries of the Pseudomonas genus: proposal of Stutzerimonas gen. nov." Syst. Appl. Microbiol. (2022) 45(1):126289.
Validation List No. 204 (2022), PubMed: abstract
Validation List No. 204: "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2022) 72(3):005260.
Li J et al. (2020), PubMed: abstract
Li, J., Wang, L.-h., Xiang, F.-g., Ding, W.-l., Xi, L.-j., Wang, M.-q., Xiao, Z.-j., and Liu, J.-g. "Pseudomonas phragmitis sp. nov., isolated from petroleum polluted river sediment." Int. J. Syst. Evol. Microbiol. (2020) 70(1):364-372.
Saati-Santamaría Z et al. (2021), doi: 10.3390/biology10080782, PubMed: abstract
Saati-Santamaría, Z., Peral-Aranega, E., Velázquez, E., Rivas, R., and García-Fraile, P. "Phylogenomic analyses of the genus Pseudomonas lead to the rearrangement of several species and the definition of new genera." Biology (Basel) (2021) 10(8):782.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0375821 organism-specific Genomes On Line Database
2767802282: Pseudomonas phragmitis S-6-2 organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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