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Taxonomy browser (Dickeya)

Dickeya

Taxonomy ID: 204037 (for references in articles please use NCBI:txid204037)
current name
Dickeya Samson et al. 2005
NCBI BLAST name: enterobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 26,910 -
Protein 538,944 20,791
Structure 130 -
Genome 13 1
Popset 232 147
GEO Datasets 53 -
PubMed Central 3,480 1,755
Gene 61,953 -
SRA Experiments 385 -
Protein Clusters 5,259 429
Identical Protein Groups 234,876 20,791
BioProject 161 1
BioSample 749 -
Assembly 249 -
PubChem BioAssay 10 -
Taxonomy 300 1

Comments and References:

Dickeya (LPSN link)
Parkinson N et al. (2009)
Parkinson, N., Stead, D., Bew, J., Heeney, J., Tsror Lahkim, L., and Elphinstone, J. "Dickeya species relatedness and clade structure determined by comparison of recA sequences." Int. J. Syst. Evol. Microbiol. (2009) 59:2388-2393.
Samson R et al. (2005)
Samson, R., Legendre, J.B., Christen, R., Fischer-Le Saux, M., Achouak, W., and Gardan, L. "Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the genus Dickeya gen. nov. as Dickeya chrysanthemi comb. nov. and Dickeya paradisiaca comb. nov. and delineation of four novel species, Dickeya dadantii sp. nov., Dickeya dianthicola sp. nov., Dickeya dieffenbachiae sp. nov. and Dickeya zeae sp. nov." Int. J. Syst. Evol. Microbiol. (2005) 55:1415-1427.
Zhang Y et al. (2016b)
Zhang, Y., Fan, Q., and Loria, R. "A re-evaluation of the taxonomy of phytopathogenic genera Dickeya and Pectobacterium using whole-genome sequencing data." Syst. Appl. Microbiol. (2016) 39:252-259.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Dickeya taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Dickeya taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Dickeya Samson, Legendre, Christen, Fischer-Le Saux, Achouak & Gardan, 2005 taxonomy/phylogenetic Ocean Biogeographic Information System
Dickeya Samson, Legendre, Christen, Fischer-Le Saux, Achouak & Gardan, 2005 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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