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Taxonomy browser (Bifidobacteriaceae)

Bifidobacteriaceae

Taxonomy ID: 31953 (for references in articles please use NCBI:txid31953)
current name
Bifidobacteriaceae Stackebrandt et al. 1997 emend. Zhi et al. 2009
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: family
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Bifidobacteriales
   Entrez records   
Database name Subtree links Direct links
Nucleotide 380,351 -
Protein 4,544,318 36
Structure 202 -
Genome 152 -
Popset 358 202
Conserved Domains 13 6
GEO Datasets 1,048 -
PubMed Central 42,191 3,875
Gene 163,569 -
SRA Experiments 6,827 7
GEO Profiles 6,601 -
Protein Clusters 7,058 6
Identical Protein Groups 1,684,629 36
BioProject 1,248 3
BioSample 22,287 7
Assembly 6,237 -
Genetic Testing Registry 1 -
PubChem BioAssay 148 -
Taxonomy 1,105 1

Comments and References:

Lugli GA et al. (2017)
Lugli, G.A., Milani, C., Turroni, F., Duranti, S., Mancabelli, L., Mangifesta, M., Ferrario, C., Modesto, M., Mattarelli, P., Killer, J., van Sinderen, D., and Ventura, M. "Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family." BMC Genomics (2017) 18:568.
Stackebrandt E et al. (1997b)
Stackebrandt, E., Rainey, F.A., and Ward-Rainey, N.L. "Proposal for a new hierarchic classification system, Actinobacteria classis nov." Int. J. Syst. Bacteriol. (1997) 47:479-491. [No PubMed record available.]
Zhi XY et al. (2009)
Zhi, X.-Y., Li, W.-J., and Stackebrandt, E. "An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa." Int. J. Syst. Evol. Microbiol. (2009) 59(3):589-608.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bifidobacteriaceae taxonomy/phylogenetic Encyclopedia of life
2806310579: unclassified Bifidobacteriaceae BinFWLB1mb31 organism-specific Integrated Microbial Genomes
Bifidobacteriaceae taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Bifidobacteriaceae (Stackebrandt, Rainey & Ward-Rainey, 1997) emend. Zhi, Li & Stackebrandt, 2009 taxonomy/phylogenetic Ocean Biogeographic Information System
Bifidobacteriaceae (Stackebrandt, Rainey & Ward-Rainey, 1997) emend. Zhi, Li & Stackebrandt, 2009 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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