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IDs: 254238 [UID] 167708 [GenBank] 254238 [RefSeq]
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ URL -- http://www.jgi.doe.gov JGI Project ID: 4085034 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 571 Contacts: Christopher L. ... Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) more
##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeqAnnotation Name::GCF_000145615.1-RS_2024_04_07Annotation Date::04/07/2024 08:26:42Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)Annotation Method::Best-placed reference protein set; GeneMarkS-2+Annotation Software revision::6.7Features Annotated::Gene; CDS; rRNA; tRNA; ncRNAGenes (total)::2,822CDSs (total)::2,745Genes (coding)::2,697CDSs (with protein)::2,697Genes (RNA)::77rRNAs::5, 5, 5 (5S, 16S, 23S)complete rRNAs::5, 5, 5 (5S, 16S, 23S)tRNAs::57ncRNAs::5Pseudo Genes (total)::48CDSs (without protein)::48Pseudo Genes (ambiguous residues)::0 of 48Pseudo Genes (frameshifted)::23 of 48Pseudo Genes (incomplete)::27 of 48Pseudo Genes (internal stop)::11 of 48Pseudo Genes (multiple problems)::11 of 48CRISPR Arrays::5##Genome-Annotation-Data-END##
##MIGS-Data-START##investigation_type::bacteria_archaeaproject_name::Thermoanaerobacterium thermosaccharolyticum DSM 571collection_date::Missinglat_lon::Missingdepth::Missingalt_elev::Missingcountry::Missingenvironment::Missingnum_replicons::Missingref_biomaterial::DSM 571, ATCC 7956, NCA 3814, NCIB 9385biotic_relationship::Free livingtrophic_level::Missingrel_to_oxygen::Obligate anaerobeisol_growth_condt::Missingsequencing_meth::WGSassembly::Newbler v. 2.3 (pre-release)finishing_strategy::FinishedGOLD Stamp ID::Gi02556Type Strain::YesGreengenes ID::266941Isolation Comments::isolated by McClung in 1935Cell Shape::Rod-shapedMotility::MotileSporulation::SporulatingTemperature Range::ThermophileTemperature Optimum::55-60CGram Staining::Gram+Diseases::None##MIGS-Data-END##
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