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Source database (GenBank or RefSeq) File type

ASM20981v1

Organism name:

Butyrivibrio fibrisolvens 16/4 (firmicutes)

Taxonomy check:

Inconclusive

Infraspecific name:

Strain: 16-Apr

BioSample:

SAMEA3138350

BioProject:

PRJNA39147

Submitter:

MetaHIT

Date:

2010/03/25

Assembly type:

Assembly level:

Chromosome

Genome representation:

full

Excluded from RefSeq:

genome length too small

GenBank assembly accession:

GCA_000209815.1 (latest)

RefSeq assembly accession:

GCF_000209815.1 (suppressed)

RefSeq assembly and GenBank assembly identical:

yes

IDs: 589068 [UID] 272378 [GenBank] 589068 [RefSeq]

See Genome Information for Butyrivibrio fibrisolvens

Pathogen Detection Resources

There are 19 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000209815.1	=	GCF_000209815.1	ASM20981v1	Chromosome	Latest GenBank, RefSeq suppressed

Comment

This is a reference genome for the metaHIT project DNA source: Rowett Institute of Nutrition and Health, University of Aberdeen -- http://www.rowett.ac.uk/divisions/ghp/ Sequencing technology: 454
Genome coverage: 63x
Annotation was added using ab initio prediction IMG/ER -- http://img.jgi.doe.gov/submit (Markowitz, Szeto et ... al. 2007).  more

Global statistics

Total sequence length	3,164,379
Total ungapped length	3,116,873
Gaps between scaffolds	0
Number of scaffolds	1
Scaffold N50	3,164,379
Scaffold L50	1
Number of contigs	42
Contig N50	184,380
Contig L50	8
Total number of chromosomes and plasmids	1
Number of component sequences (WGS or clone)	1

	ANI	Query coverage	Subject coverage
Declared type	86.77	0.85	0.54
Best-match type	86.77	0.85	0.54

Assembly

Genome Assembly

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ASM20981v1

See Genome Information for Butyrivibrio fibrisolvens

Pathogen Detection Resources

There are 19 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Global assembly definition

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Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result