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ASM74289v1

Organism name:
Bacillus anthracis str. Vollum (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: Vollum
BioSample:
SAMN02736982
BioProject:
PRJNA243521
Submitter:
Los Alamos National Laboratory
Date:
2014/08/21
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000742895.1 (latest)
RefSeq assembly accession:
GCF_000742895.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
Newbler v. 2.6; Velvet v. 1.2.08; Allpaths v. 44837; Phrap v. SPS - 4.24
Genome coverage:
315xz
Sequencing technology:
Illumina; 454

IDs: 205001 [UID] 1191088 [GenBank] 1492698 [RefSeq]

See Genome Information for Bacillus anthracis

There are 878 assemblies for this organism

See more

History (Show revision history)

Comment

The DNA was obtained from USAMRIID
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_000742895.1-RS_2024_04_06
Annotation Date::04/06/2024 01:53:03
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::5,761
CDSs (total)::5,628
Genes (coding)::5,227
CDSs (with protein)::5,227
Genes (RNA)::133
rRNAs::11, 11, 11 (5S, 16S, 23S)
complete rRNAs::11, 11, 11 (5S, 16S, 23S)
tRNAs::95
ncRNAs::5
Pseudo Genes (total)::401
CDSs (without protein)::401
Pseudo Genes (ambiguous residues)::0 of 401
Pseudo Genes (frameshifted)::282 of 401
Pseudo Genes (incomplete)::94 of 401
Pseudo Genes (internal stop)::93 of 401
Pseudo Genes (multiple problems)::59 of 401
##Genome-Annotation-Data-END##

Global statistics

Total sequence length5,506,189
Total ungapped length5,506,189
Total number of chromosomes and plasmids3

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000742905.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP007666.1=NZ_CP007666.1
Plasmid unnamed_1CP007664.1=NZ_CP007664.1
Plasmid unnamed_2CP007665.1=NZ_CP007665.1

Assembly statistics

MoleculeTotal
Length
All5,506,189
Chromosome 5,229,469
Plasmid unnamed_194,889
Plasmid unnamed_2181,831

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus anthracis str. VollumBacillus anthracis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022221345.1Bacillus anthracistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022221345.1Bacillus anthracistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.99100.0099.99
Best-match type99.99100.0099.99

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna