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ASM96450v1

Organism name:
Komagataeibacter xylinus NBRC 13693 (a-proteobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: NBRC 13693
BioSample:
SAMD00036645
BioProject:
PRJDB503
Submitter:
Kinki University
Date:
2015/03/21
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000964505.1 (latest)
RefSeq assembly accession:
GCF_000964505.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BANJ01
Assembly method:
Velent v. 1.0.3
Genome coverage:
90.3x
Sequencing technology:
Illumina HiSeq2000

IDs: 317621 [UID] 1712038 [GenBank] 1894188 [RefSeq]

See Genome Information for Komagataeibacter xylinus

Pathogen Detection Resources

There are 12 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,335,999
Total ungapped length3,335,999
Number of contigs211
Contig N5070,122
Contig L5015
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)211

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,335,9992113,335,99970,12200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Komagataeibacter xylinus NBRC 13693Komagataeibacter xylinus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_003207915.1Komagataeibacter xylinussuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003207815.1Komagataeibacter oboedienstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type84.6155.6050.66
Best-match type98.8690.3979.83

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchcoverage is less than 80%