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ASM2320621v1

Organism name:
Butyrivibrio fibrisolvens (firmicutes)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: ASCUSDY19
BioSample:
SAMN17020243
BioProject:
PRJNA683070
Submitter:
Ascus Biosciences
Date:
2022/05/02
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_023206215.1 (latest)
RefSeq assembly accession:
GCF_023206215.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
SPAdes v. 3.12; CANU v. 1.9
Expected final version:
yes
Genome coverage:
100.0x
Sequencing technology:
Illumina; Oxford Nanopore MinION

IDs: 12634551 [UID] 33068758 [GenBank] 33098598 [RefSeq]

See Genome Information for Butyrivibrio fibrisolvens

There are 19 assemblies for this organism

See more

History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/29/2024 07:10:51
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,793
CDSs (total)::3,702
Genes (coding)::3,661
CDSs (with protein)::3,661
Genes (RNA)::91
rRNAs::7, 7, 7 (5S, 16S, 23S)
complete rRNAs::7, 7, 7 (5S, 16S, 23S)
tRNAs::67
ncRNAs::3
Pseudo Genes (total)::41
CDSs (without protein)::41
Pseudo Genes (ambiguous residues)::0 of 41
Pseudo Genes (frameshifted)::18 of 41
Pseudo Genes (incomplete)::20 of 41
Pseudo Genes (internal stop)::3 of 41
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,453,070
Total ungapped length4,453,070
Total number of chromosomes and plasmids2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_023206225.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP065800.1=NZ_CP065800.1
Chromosome 2CP065801.1=NZ_CP065801.1

Assembly statistics

MoleculeTotal
Length
All4,453,070
Chromosome 14,116,214
Chromosome 2336,856

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Butyrivibrio fibrisolvensButyrivibrio fibrisolvens

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_037113525.1Butyrivibrio fibrisolvenssuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_037113525.1Butyrivibrio fibrisolvenssuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type89.2935.6832.20
Best-match type89.2935.6832.20

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-matchna