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ASM2599461v1

Organism name:
Komagataeibacter xylinus NBRC 15237 (a-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NBRC 15237
BioSample:
SAMD00036720
BioProject:
PRJDB1057
Submitter:
Tokyo University of Agriculture
Date:
2022/08/03
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_025994615.1 (latest)
RefSeq assembly accession:
GCF_025994615.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BAQT01
Assembly method:
Velvet v. 1.1.02
Genome coverage:
288x
Sequencing technology:
llumina Solexa

IDs: 14310631 [UID] 37158438 [GenBank] 37276198 [RefSeq]

See Genome Information for Komagataeibacter xylinus

Pathogen Detection Resources

There are 12 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,626,170
Total ungapped length3,626,170
Number of contigs576
Contig N5042,574
Contig L5026
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)576

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,626,1705763,626,17042,57400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Komagataeibacter xylinus NBRC 15237Komagataeibacter xylinus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_003207915.1Komagataeibacter xylinussuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003207915.1Komagataeibacter xylinussuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.4198.47
Best-match type99.9999.4198.47

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna