U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM3023782v1

Organism name:
Lactobacillus delbrueckii (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: C37
BioSample:
SAMN35073039
BioProject:
PRJNA972326
Submitter:
Hebei University of Science & Technology
Date:
2023/06/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_030237825.1 (latest)
RefSeq assembly accession:
GCF_030237825.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JASGSJ01
Assembly method:
SPAdes v. 2.3
Expected final version:
yes
Genome coverage:
100x
Sequencing technology:
Illumina NovaSeq

IDs: 16847981 [UID] 43282108 [GenBank] 43368978 [RefSeq]

See Genome Information for Lactobacillus delbrueckii

There are 572 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,833,869
Total ungapped length1,833,869
Number of contigs106
Contig N5087,510
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)106

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,833,8691061,833,86987,51000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Lactobacillus delbrueckiiLactobacillus delbrueckii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000056065.1Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000056065.1Lactobacillus delbrueckiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.4291.4789.94
Best-match type99.4291.4789.94

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna