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IMG-taxon 2597490338 annotated assembly

Organism name:
Thermoanaerobacter thermohydrosulfuricus (firmicutes)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: DSM 569
BioSample:
SAMN04244560
BioProject:
PRJEB15844
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/10/21
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_900102395.1 (latest)
RefSeq assembly accession:
GCF_900102395.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FNBS01
Genome coverage:
443x

IDs: 865911 [UID] 3637168 [GenBank] 3908258 [RefSeq]

See Genome Information for Thermoanaerobacter thermohydrosulfuricus

Pathogen Detection Resources

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,683,588
Total ungapped length2,680,057
Gaps between scaffolds0
Number of scaffolds158
Scaffold N5029,751
Scaffold L5030
Number of contigs163
Contig N5029,751
Contig L5030
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)158

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,683,5881582,680,05729,75150

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Thermoanaerobacter thermohydrosulfuricusThermoanaerobacter thermohydrosulfuricus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000262445.1Thermoanaerobacter siderophilustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.6278.3182.70

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchdeclared species has no type-assembly