U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



3259STDY5912447-2

Organism name:
Burkholderia vietnamiensis (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: JW13
BioSample:
SAMEA2696665
BioProject:
PRJEB6927
Submitter:
SC
Date:
2019/02/05
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900634425.1 (latest)
RefSeq assembly accession:
GCF_900634425.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAAFK01
Genome coverage:
50x

IDs: 2275921 [UID] 8517978 [GenBank] 8776998 [RefSeq]

See Genome Information for Burkholderia vietnamiensis

There are 213 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length7,918,610
Total ungapped length7,918,610
Number of contigs16
Contig N501,872,953
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)16

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,918,610167,918,6101,872,95300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Burkholderia vietnamiensisBurkholderia vietnamiensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_020099355.1Burkholderia vietnamiensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_020099355.1Burkholderia vietnamiensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1579.3190.62
Best-match type99.1579.3190.62

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna