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ASM90283026v1

Organism name:
Burkholderia vietnamiensis (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: BCC0190
BioSample:
SAMEA6503586
BioProject:
PRJEB35318
Submitter:
CARDIFF SCHOOL OF BIOSCIENCES
Date:
2020/06/09
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902830265.1 (latest)
RefSeq assembly accession:
GCF_902830265.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CADESV01
Genome coverage:
84x

IDs: 7271951 [UID] 20032198 [GenBank] 20138598 [RefSeq]

See Genome Information for Burkholderia vietnamiensis

Pathogen Detection Resources

There are 213 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length6,164,308
Total ungapped length6,163,702
Gaps between scaffolds0
Number of scaffolds44
Scaffold N50523,281
Scaffold L506
Number of contigs46
Contig N50509,316
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)44

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced6,164,308446,163,702523,28120

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Burkholderia vietnamiensisBurkholderia vietnamiensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_020099355.1Burkholderia vietnamiensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_020099355.1Burkholderia vietnamiensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.0184.5775.20
Best-match type99.0184.5775.20

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna