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ASM90283029v1

Organism name:
Burkholderia vietnamiensis (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: LMG 10929
BioSample:
SAMEA6503572
BioProject:
PRJEB35318
Submitter:
CARDIFF SCHOOL OF BIOSCIENCES
Date:
2020/06/09
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_902830295.1 (latest)
RefSeq assembly accession:
GCF_902830295.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CADETD01
Genome coverage:
75x

IDs: 7271941 [UID] 20032178 [GenBank] 20138698 [RefSeq]

See Genome Information for Burkholderia vietnamiensis

Pathogen Detection Resources

There are 213 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length6,876,569
Total ungapped length6,876,167
Gaps between scaffolds0
Number of scaffolds63
Scaffold N50308,470
Scaffold L506
Number of contigs65
Contig N50283,865
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)63

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced6,876,569636,876,167308,47020

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Burkholderia vietnamiensisBurkholderia vietnamiensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000959445.1Burkholderia vietnamiensis LMG 10929type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000959445.1Burkholderia vietnamiensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.8899.09
Best-match type99.9999.8899.09

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna