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Accession: PRJNA547626 ID: 547626

Pseudomonas aeruginosa

Genome sequencing and assembly of Pseudomonas aeruginosa from the Spanish Network for Research in Infectious Diseases (REIPI)

See Genome Information for Pseudomonas aeruginosa
Genomic analysis of isolates collected from bloodstream infections in patients as part of the Spanish Network for Research in Infectious Diseases (REIPI).
AccessionPRJNA547626
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismPseudomonas aeruginosa[Taxonomy ID: 287]
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Grants
  • "Pseudomonas aeruginosa Genomic Islands and Virulence" (Grant ID R01 AI075191, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "Accessory Virulence Factors of Pseudomonas aeruginosa" (Grant ID R01 AI118257, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "Biomarkers for Highly Virulent Pseudomonas aeruginosa Strains" (Grant ID R21 AI129167, National Institute of Allergy and Infectious Diseases Extramural Activities)
SubmissionRegistration date: 7-Jul-2019
Northwestern University Feinberg School of Medicine
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1790
WGS master38
Protein Sequences92010
Other datasets
BioSample38
Assembly38
Assembly details:
Assembly levelNumber of Assemblies
38
38
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_013178475.1ContigJABLUI000000000SAMN14970732
PASP352
GCA_013178425.1ContigJABLTW000000000SAMN14970744
PASP612
GCA_013178435.1ContigJABLTU000000000SAMN14970746
PASP657
GCA_013178575.1ContigJABLUJ000000000SAMN14970731
PASP315
GCA_013178515.1ContigJABLTZ000000000SAMN14970741
PASP499
GCA_013178535.1ContigJABLUA000000000SAMN14970740
PASP496
GCA_013178505.1ContigJABLTY000000000SAMN14970742
PASP518
GCA_013178495.1ContigJABLTX000000000SAMN14970743
PASP527
GCA_013178605.1ContigJABLUB000000000SAMN14970739
PASP475
GCA_013178595.1ContigJABLUC000000000SAMN14970738
PASP471
GCA_013178655.1ContigJABLUE000000000SAMN14970736
PASP450
GCA_013178635.1ContigJABLUD000000000SAMN14970737
PASP453
GCA_013178785.1ContigJABLUQ000000000SAMN14970724
PASP146
GCA_013178765.1ContigJABLUL000000000SAMN14970729
PASP269
GCA_013178745.1ContigJABLUK000000000SAMN14970730
PASP309
GCA_013178735.1ContigJABLUM000000000SAMN14970728
PASP251
GCA_013178705.1ContigJABLUG000000000SAMN14970734
PASP398
GCA_013178685.1ContigJABLUH000000000SAMN14970733
PASP388
GCA_013178665.1ContigJABLUF000000000SAMN14970735
PASP415
GCA_013178845.1ContigJABLUR000000000SAMN14970723
PASP048
GCA_013178835.1ContigJABLUP000000000SAMN14970725
PASP198
GCA_013178815.1ContigJABLUO000000000SAMN14970726
PASP204
GCA_013178875.1ContigJABLUN000000000SAMN14970727
PASP208
GCA_013178895.1ContigJABLTV000000000SAMN14970745
PASP639
GCA_006705085.1ContigVIIP00000000SAMN12162686
PASP010
GCA_006705075.1ContigVIIO00000000SAMN12162687
PASP063
GCA_006705045.1ContigVIIM00000000SAMN12162689
PASP118
GCA_006705065.1ContigVIIN00000000SAMN12162688
PASP107
GCA_006704995.1ContigVIIJ00000000SAMN12162692
PASP170
GCA_006704985.1ContigVIIL00000000SAMN12162690
PASP145
GCA_006704975.1ContigVIIK00000000SAMN12162691
PASP163
GCA_006704955.1ContigVIII00000000SAMN12162693
PASP174
GCA_006704885.1ContigVIIF00000000SAMN12162696
PASP368
GCA_006704945.1ContigVIIH00000000SAMN12162694
PASP199
GCA_006704895.1ContigVIIG00000000SAMN12162695
PASP363
GCA_006704875.1ContigVIIE00000000SAMN12162697
PASP375
GCA_006704865.1ContigVIID00000000SAMN12162698
PASP418
GCA_006704815.1ContigVIIC00000000SAMN12162699
PASP614

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    Pseudomonas aeruginosa
    Genome sequencing and assembly of Pseudomonas aeruginosa from the Spanish Network for Research in Infectious Diseases (REIPI)
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