ID 840837 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJEB52935 ID: 840837

EMG produced TPA metagenomics assembly of PRJNA473901 data set (Gut microbiota of honeybees Metagenome).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA473901, and was assembled with metaSPAdes v3. More...

Accession	PRJEB52935
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 20-May-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5814
WGS master	75
Publications
PubMed	1
PMC	1
Other datasets
BioSample	75
Assembly	75

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

75
75

Assembly	WGS	BioSample	Taxonomy
GCA_946478425.1	CAMLCI000000000	SAMEA110697499	Achromobacter spanius
GCA_946477625.1	CAMKZM000000000	SAMEA110697515	Acidovorax radicis
GCA_946478025.1	CAMLAO000000000	SAMEA110697498	Acinetobacter johnsonii
GCA_946478085.1	CAMLAQ000000000	SAMEA110697516	Bartonella apis
GCA_946478125.1	CAMLAU000000000	SAMEA110697567	Bartonella apis
GCA_946478015.1	CAMLAJ000000000	SAMEA110697502	Bifidobacterium asteroides
GCA_946478035.1	CAMLAM000000000	SAMEA110697522	Bifidobacterium asteroides
GCA_946478605.1	CAMLCS000000000	SAMEA110697562	Bifidobacterium asteroides
GCA_946477215.1	CAMKXI000000000	SAMEA110697556	Bifidobacterium asteroides
GCA_946477835.1	CAMKZS000000000	SAMEA110697545	Bifidobacterium asteroides
GCA_946477335.1	CAMKXP000000000	SAMEA110697568	Bifidobacterium asteroides
GCA_946478105.1	CAMLAS000000000	SAMEA110697544	Bifidobacterium asteroides
GCA_946477425.1	CAMKYF000000000	SAMEA110697548	Bifidobacterium asteroides
GCA_946477735.1	CAMKZD000000000	SAMEA110697532	Bifidobacterium asteroides
GCA_946477915.1	CAMKZZ000000000	SAMEA110697543	Bifidobacterium coryneforme
GCA_946476895.1	CAMKWJ000000000	SAMEA110697546	Cutibacterium acnes
GCA_946477295.1	CAMKXV000000000	SAMEA110697565	Enterobacter ludwigii
GCA_946476945.1	CAMKWE000000000	SAMEA110697536	Frischella perrara
GCA_946477605.1	CAMKYU000000000	SAMEA110697520	Frischella perrara
GCA_946477435.1	CAMKYG000000000	SAMEA110697505	Gilliamella apicola
GCA_946477905.1	CAMLAF000000000	SAMEA110697549	Gilliamella apicola
GCA_946478375.1	CAMLBV000000000	SAMEA110697531	Gilliamella apicola
GCA_946478095.1	CAMLAV000000000	SAMEA110697564	Gilliamella apicola
GCA_946477645.1	CAMKZB000000000	SAMEA110697507	Gilliamella apis
GCA_946477925.1	CAMLAG000000000	SAMEA110697529	Hafnia alvei
GCA_946477705.1	CAMKYX000000000	SAMEA110697552	Lactobacillus apis
GCA_946477655.1	CAMKYS000000000	SAMEA110697504	Lactobacillus apis
GCA_946476845.1	CAMKWG000000000	SAMEA110697539	Lactobacillus apis
GCA_946478225.1	CAMLBE000000000	SAMEA110697557	Lactobacillus apis
GCA_946478165.1	CAMLAY000000000	SAMEA110697510	Lactobacillus apis
GCA_946478325.1	CAMLBL000000000	SAMEA110697560	Lactobacillus apis
GCA_946478145.1	CAMLAW000000000	SAMEA110697521	Lactobacillus apis
GCA_946477675.1	CAMKYY000000000	SAMEA110697528	Lactobacillus apis
GCA_946477285.1	CAMKXM000000000	SAMEA110697558	Lactobacillus helsingborgensis
GCA_946477275.1	CAMKXH000000000	SAMEA110697534	Lactobacillus helsingborgensis
GCA_946478055.1	CAMLAK000000000	SAMEA110697553	Lactobacillus helsingborgensis
GCA_946477265.1	CAMKXJ000000000	SAMEA110697524	Lactobacillus helsingborgensis
GCA_946477785.1	CAMKZK000000000	SAMEA110697550	Lactobacillus kimbladii
GCA_946478295.1	CAMLBK000000000	SAMEA110697555	Lactobacillus kimbladii
GCA_946477225.1	CAMKXZ000000000	SAMEA110697566	Pantoea agglomerans
GCA_946478115.1	CAMLAT000000000	SAMEA110697495	Pseudomonas aeruginosa
GCA_946477255.1	CAMKYA000000000	SAMEA110697563	Rahnella variigena
GCA_946477405.1	CAMKYD000000000	SAMEA110697500	Serratia marcescens
GCA_946478495.1	CAMLBY000000000	SAMEA110697523	Snodgrassella alvi
GCA_946477615.1	CAMKZA000000000	SAMEA110697513	Sphingomonas paucimobilis
GCA_946477635.1	CAMKZG000000000	SAMEA110697514	Sphingomonas spermidinifaciens
GCA_946477555.1	CAMKYV000000000	SAMEA110697506	uncultured Bartonella sp.
GCA_946477575.1	CAMKYT000000000	SAMEA110697525	uncultured Bartonella sp.
GCA_946478235.1	CAMLBF000000000	SAMEA110697519	uncultured Bartonella sp.
GCA_946477775.1	CAMKZL000000000	SAMEA110697494	uncultured Bifidobacterium sp.
GCA_946476875.1	CAMKWB000000000	SAMEA110697540	uncultured Bifidobacterium sp.
GCA_946478215.1	CAMLBA000000000	SAMEA110697508	uncultured Commensalibacter sp.
GCA_946478565.1	CAMLCL000000000	SAMEA110697559	uncultured Commensalibacter sp.
GCA_946477505.1	CAMKYP000000000	SAMEA110697517	uncultured Dechloromonas sp.
GCA_946477985.1	CAMLAH000000000	SAMEA110697554	uncultured Dysgonomonas sp.
GCA_946478305.1	CAMLBO000000000	SAMEA110697561	uncultured Enterobacterales bacterium
GCA_946477695.1	CAMKZN000000000	SAMEA110697497	uncultured Enterobacteriaceae bacterium
GCA_946478465.1	CAMLBZ000000000	SAMEA110697533	uncultured Gilliamella sp.
GCA_946477375.1	CAMKXW000000000	SAMEA110697530	uncultured Gilliamella sp.
GCA_946478515.1	CAMLCF000000000	SAMEA110697537	uncultured Gilliamella sp.
GCA_946477755.1	CAMKZF000000000	SAMEA110697509	uncultured Lactobacillaceae bacterium
GCA_946477855.1	CAMKZU000000000	SAMEA110697535	uncultured Lactobacillus sp.
GCA_946477955.1	CAMLAA000000000	SAMEA110697542	uncultured Lactobacillus sp.
GCA_946477345.1	CAMKXS000000000	SAMEA110697527	uncultured Lactobacillus sp.
GCA_946477715.1	CAMKYW000000000	SAMEA110697551	uncultured Lactobacillus sp.
GCA_946477745.1	CAMKZO000000000	SAMEA110697501	uncultured Lactobacillus sp.
GCA_946477725.1	CAMKZC000000000	SAMEA110697512	uncultured Lactobacillus sp.
GCA_946478275.1	CAMLBM000000000	SAMEA110697547	uncultured Lactobacillus sp.
GCA_946477685.1	CAMKZE000000000	SAMEA110697526	uncultured Lactobacillus sp.
GCA_946477845.1	CAMKZT000000000	SAMEA110697541	uncultured Lactobacillus sp.
GCA_946477895.1	CAMKZY000000000	SAMEA110697538	uncultured Lactobacillus sp.
GCA_946477465.1	CAMKYJ000000000	SAMEA110697496	uncultured Neisseriaceae bacterium
GCA_946477415.1	CAMKYE000000000	SAMEA110697503	uncultured Neisseriaceae bacterium
GCA_946477935.1	CAMLAC000000000	SAMEA110697511	uncultured Sphingomonas sp.
GCA_946478205.1	CAMLBD000000000	SAMEA110697518	uncultured Ventosimonas sp.

BioProject

Result Filters

Display Settings:

Send to:

EMG produced TPA metagenomics assembly of PRJNA473901 data set (Gut microbiota of honeybees Metagenome).

Supplemental Content

Related information

Recent activity