ID 953780 - BioProject

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Accession: PRJNA953780 ID: 953780

Synthetic microbial community assembled from plant-isolated bacteria

These bacterial isolates were used to assemble a set of synthetic communities in which interspecific interactions were measured and compared. More...

Accession	PRJNA953780
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 9-Apr-2023 University of Chicago
Relevance	Microbial Community Ecology

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	56
SRA Experiments	837
Other datasets
BioSample	355
Assembly	56

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

56
56

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_030209895.1	JARVRC000000000	SAMN34123760	CFBP2214	Agrobacterium sp. CFBP2214
GCA_030209845.1	JARVRD000000000	SAMN34123761	fls2-241-TYG-188a	Agrobacterium sp. fls2-241-TYG-188a
GCA_030209855.1	JARVRE000000000	SAMN34123762	lyk4-40-TYG-31	Agrobacterium sp. lyk4-40-TYG-31
GCA_030209835.1	JARVRF000000000	SAMN34123763	efr-133-R2A-120	Arthrobacter sp. efr-133-R2A-120
GCA_030209795.1	JARVRG000000000	SAMN34123764	efr-133-R2A-63	Arthrobacter sp. efr-133-R2A-63
GCA_030208915.1	JARVTA000000000	SAMN34123810	efr-133-TYG-104	Arthrobacter sp. efr-133-TYG-104
GCA_030209755.1	JARVRH000000000	SAMN34123765	efr-133-TYG-118	Arthrobacter sp. efr-133-TYG-118
GCA_030209785.1	JARVRI000000000	SAMN34123766	efr-133-TYG-120	Arthrobacter sp. efr-133-TYG-120
GCA_030208885.1	JARVTB000000000	SAMN34123811	fls2-241-R2A-172	Arthrobacter sp. fls2-241-R2A-172
GCA_030209745.1	JARVRJ000000000	SAMN34123767	fls2-241-R2A-200	Arthrobacter sp. fls2-241-R2A-200
GCA_030209735.1	JARVRK000000000	SAMN34123768	lyk4-R2A-2	Bacillus sp. lyk4-R2A-2
GCA_030209705.1	JARVRL000000000	SAMN34123769	MEB006b	Brevundimonas sp. MEB006b
GCA_030209665.1	JARVRM000000000	SAMN34123770	lyk4-R2A-23	Burkholderia sp. lyk4-R2A-23
GCA_030209645.1	JARVRO000000000	SAMN34123772	ME-Dv--P-122a	Curtobacterium sp. ME-Dv--P-122a
GCA_030209655.1	JARVRN000000000	SAMN34123771	MEB011	Curtobacterium sp. MEB011
GCA_030209635.1	JARVRQ000000000	SAMN34123774	MEB024	Enterobacter sp. MEB024
GCA_030209595.1	JARVRR000000000	SAMN34123775	ME-P-080	Frigoribacterium sp. ME-P-080
GCA_030209575.1	JARVRS000000000	SAMN34123776	fls2-241-R2A-40a	Leifsonia sp. fls2-241-R2A-40a
GCA_032906585.1	JARVRP000000000	SAMN34123773	efr-133-R2A-84	Lelliottia amnigena
GCA_030209605.1	JARVRT000000000	SAMN34123777	ME-Dv--P-043b	Luteibacter sp. ME-Dv--P-043b
GCA_030209535.1	JARVRU000000000	SAMN34123778	fls2-241-R2A-57	Lysinibacillus sp. fls2-241-R2A-57
GCA_030209555.1	JARVRV000000000	SAMN34123779	LMC-P-041	Microbacterium sp. LMC-P-041
GCA_030209475.1	JARVRW000000000	SAMN34123780	lyk4-40-TSB-66	Microbacterium sp. lyk4-40-TSB-66
GCA_030209435.1	JARVRX000000000	SAMN34123781	lyk4-40-TYG-92	Mycolicibacterium sp. lyk4-40-TYG-92
GCA_030209485.1	JARVRY000000000	SAMN34123782	fls2-241-R2A-195	Novosphingobium sp. fls2-241-R2A-195
GCA_030209505.1	JARVRZ000000000	SAMN34123783	LMC-P-059a	Plantibacter sp. LMC-P-059a
GCA_030209365.1	JARVSB000000000	SAMN34123785	ME-Dv--P-095	Plantibacter sp. ME-Dv--P-095
GCA_030209375.1	JARVSC000000000	SAMN34123786	ME-Dv--P-122b	Plantibacter sp. ME-Dv--P-122b
GCA_030209415.1	JARVSA000000000	SAMN34123784	lyk4-40-MEA-4	Plantibacter sp. lyk4-40-MEA-4
GCA_030209445.1	JARVSD000000000	SAMN34123787	MEB111	Promicromonospora sp. MEB111
GCA_030208875.1	JARVTC000000000	SAMN34123812	MEB009	Pseudarthrobacter sp. MEB009
GCA_030209315.1	JARVSE000000000	SAMN34123788	efr-133-R2A-89	Pseudarthrobacter sp. efr-133-R2A-89
GCA_030209355.1	JARVSF000000000	SAMN34123789	fls2-241-R2A-127	Pseudarthrobacter sp. fls2-241-R2A-127
GCA_030209335.1	JARVSG000000000	SAMN34123790	fls2-241-R2A-168	Pseudarthrobacter sp. fls2-241-R2A-168
GCA_030209295.1	JARVSH000000000	SAMN34123791	lyk4-40-TYG-27	Pseudarthrobacter sp. lyk4-40-TYG-27
GCA_030209255.1	JARVSI000000000	SAMN34123792	CFBP2511	Pseudomonas sp. CFBP2511
GCA_030209115.1	JARVSP000000000	SAMN34123799	FR229a	Pseudomonas sp. FR229a
GCA_030208975.1	JARVSX000000000	SAMN34123807	ME-P-057	Pseudomonas sp. ME-P-057
GCA_030209015.1	JARVSU000000000	SAMN34123804	MEB105	Pseudomonas sp. MEB105
GCA_030209025.1	JARVSV000000000	SAMN34123805	MEJ086	Pseudomonas sp. MEJ086
GCA_030208985.1	JARVSW000000000	SAMN34123806	MEJ108	Pseudomonas sp. MEJ108
GCA_030209265.1	JARVSJ000000000	SAMN34123793	efr-133-R2A-59	Pseudomonas sp. efr-133-R2A-59
GCA_030209235.1	JARVSK000000000	SAMN34123794	efr-133-TYG-103a	Pseudomonas sp. efr-133-TYG-103a
GCA_030209215.1	JARVSL000000000	SAMN34123795	efr-133-TYG-23	Pseudomonas sp. efr-133-TYG-23
GCA_030209175.1	JARVSM000000000	SAMN34123796	efr-133-TYG-5	Pseudomonas sp. efr-133-TYG-5
GCA_030209165.1	JARVSN000000000	SAMN34123797	fls2-241-R2A-110	Pseudomonas sp. fls2-241-R2A-110
GCA_030209155.1	JARVSO000000000	SAMN34123798	fls2-241-TYG-175	Pseudomonas sp. fls2-241-TYG-175
GCA_030209135.1	JARVSQ000000000	SAMN34123800	lyk4-40-TSB-59a	Pseudomonas sp. lyk4-40-TSB-59a
GCA_030209075.1	JARVSR000000000	SAMN34123801	lyk4-R2A-10	Pseudomonas sp. lyk4-R2A-10
GCA_030209095.1	JARVSS000000000	SAMN34123802	lyk4-R2A-8	Pseudomonas sp. lyk4-R2A-8
GCA_030209055.1	JARVST000000000	SAMN34123803	lyk4-TYG-107	Pseudomonas sp. lyk4-TYG-107
GCA_030208925.1	JARVSY000000000	SAMN34123808	MEB032	Rhodococcus sp. MEB032
GCA_030208955.1	JARVSZ000000000	SAMN34123809	MEB041	Rhodococcus sp. MEB041
GCA_030208835.1	JARVTD000000000	SAMN34123813	efr-133-TYG-130	Variovorax sp. efr-133-TYG-130
GCA_030208825.1	JARVTF000000000	SAMN34123815	LMC-A-07	Xanthomonas sp. LMC-A-07
GCA_030208815.1	JARVTE000000000	SAMN34123814	fls2-241-TYG-148	Xanthomonas sp. fls2-241-TYG-148

SRA Data Details

Parameter	Value
Data volume, Gbases	52
Data volume, Mbytes	14837

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Synthetic microbial community assembled from plant-isolated bacteria

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