ID 1036520 - BioProject

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Accession: PRJEB68227 ID: 1036520

EMG produced TPA metagenomics assembly of PRJNA777294 data set (Tracking Genomic Characteristics across Oceanic Provinces: Contrasting Early and Mature Plastic Biofilm Communities).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA777294, and was assembled with metaspades v3.15.3. This project includes samples from the following biomes: root:Environmental:Aquatic:Marine.

Accession	PRJEB68227
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "MGnify: the microbiome analysis resource in 2020.", Nucleic Acids Res, 2020 Jan 8;48(D1):D570-D578
Submission	Registration date: 7-Nov-2023 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1228
WGS master	87
Publications
PubMed	1
PMC	1
Other datasets
BioSample	87
Assembly	87

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

87
87

Assembly	WGS	BioSample	Taxonomy
GCA_963923085.1	CAWUKY000000000	SAMEA115104844	Alteromonas macleodii
GCA_963922265.1	CAWUIA000000000	SAMEA115104850	Cellulophaga tyrosinoxydans
GCA_963922225.1	CAWUHZ000000000	SAMEA115104859	Nonlabens tegetincola
GCA_963922525.1	CAWUIR000000000	SAMEA115104804	Thalassolituus oleivorans
GCA_963922665.1	CAWUJW000000000	SAMEA115104831	Yeosuana marina
GCA_963922985.1	CAWULF000000000	SAMEA115104857	uncultured Acidimicrobiaceae bacterium
GCA_963922415.1	CAWUIP000000000	SAMEA115104883	uncultured Aliishimia sp.
GCA_963922435.1	CAWUJE000000000	SAMEA115104837	uncultured Alphaproteobacteria bacterium
GCA_963922795.1	CAWUKI000000000	SAMEA115104847	uncultured Alphaproteobacteria bacterium
GCA_963922705.1	CAWUJS000000000	SAMEA115104821	uncultured Alphaproteobacteria bacterium
GCA_963922935.1	CAWUKE000000000	SAMEA115104863	uncultured Alphaproteobacteria bacterium
GCA_963922995.1	CAWUKQ000000000	SAMEA115104808	uncultured Altererythrobacter sp.
GCA_963922925.1	CAWUJZ000000000	SAMEA115104843	uncultured Alteromonadaceae bacterium
GCA_963922845.1	CAWUJV000000000	SAMEA115104845	uncultured Alteromonas sp.
GCA_963922905.1	CAWUKS000000000	SAMEA115104861	uncultured Arenibacter sp.
GCA_963922485.1	CAWUKR000000000	SAMEA115104836	uncultured Bacteroidia bacterium
GCA_963922625.1	CAWUIS000000000	SAMEA115104840	uncultured Candidatus Melainabacteria bacterium
GCA_963922335.1	CAWUIB000000000	SAMEA115104820	uncultured Chromatiales bacterium
GCA_963923055.1	CAWULB000000000	SAMEA115104864	uncultured Chromatiales bacterium
GCA_963922495.1	CAWUIH000000000	SAMEA115104853	uncultured Coxiellaceae bacterium
GCA_963922775.1	CAWUJG000000000	SAMEA115104835	uncultured Cytophagales bacterium
GCA_963922385.1	CAWUIL000000000	SAMEA115104824	uncultured Cytophagales bacterium
GCA_963922345.1	CAWUIT000000000	SAMEA115104876	uncultured Dokdonia sp.
GCA_963922185.1	CAWUHV000000000	SAMEA115104803	uncultured Dokdonia sp.
GCA_963922615.1	CAWUJB000000000	SAMEA115104827	uncultured Flavobacteriaceae bacterium
GCA_963923065.1	CAWULA000000000	SAMEA115104849	uncultured Flavobacteriaceae bacterium
GCA_963922645.1	CAWUJP000000000	SAMEA115104854	uncultured Flavobacteriaceae bacterium
GCA_963922585.1	CAWUIK000000000	SAMEA115104858	uncultured Flavobacteriales bacterium
GCA_963922255.1	CAWUIC000000000	SAMEA115104884	uncultured Flavobacterium sp.
GCA_963922835.1	CAWUKK000000000	SAMEA115104846	uncultured Flavobacterium sp.
GCA_963922965.1	CAWUKA000000000	SAMEA115104838	uncultured Gammaproteobacteria bacterium
GCA_963922955.1	CAWUKM000000000	SAMEA115104818	uncultured Gammaproteobacteria bacterium
GCA_963922215.1	CAWUHY000000000	SAMEA115104829	uncultured Gammaproteobacteria bacterium
GCA_963922735.1	CAWUKN000000000	SAMEA115104828	uncultured Gammaproteobacteria bacterium
GCA_963922685.1	CAWUJM000000000	SAMEA115104802	uncultured Gammaproteobacteria bacterium
GCA_963922815.1	CAWUKD000000000	SAMEA115104826	uncultured Gammaproteobacteria bacterium
GCA_963922365.1	CAWUJU000000000	SAMEA115104855	uncultured Gammaproteobacteria bacterium
GCA_963922315.1	CAWUID000000000	SAMEA115104839	uncultured Gammaproteobacteria bacterium
GCA_963922245.1	CAWUJO000000000	SAMEA115104807	uncultured Hydrogenophaga sp.
GCA_963922325.1	CAWUJN000000000	SAMEA115104813	uncultured Hyphomicrobiaceae bacterium
GCA_963922535.1	CAWUIN000000000	SAMEA115104817	uncultured Hyphomicrobiaceae bacterium
GCA_963922855.1	CAWUKO000000000	SAMEA115104865	uncultured Hyphomicrobiaceae bacterium
GCA_963922635.1	CAWUJX000000000	SAMEA115104830	uncultured Hyphomicrobiales bacterium
GCA_963922405.1	CAWUJF000000000	SAMEA115104848	uncultured Hyphomicrobiales bacterium
GCA_963922465.1	CAWUJL000000000	SAMEA115104814	uncultured Hyphomonadaceae bacterium
GCA_963923015.1	CAWUKW000000000	SAMEA115104877	uncultured Hyphomonadaceae bacterium
GCA_963922875.1	CAWUJH000000000	SAMEA115104860	uncultured Ketobacter sp.
GCA_963923075.1	CAWULE000000000	SAMEA115104811	uncultured Leptolyngbya sp.
GCA_963922915.1	CAWUJI000000000	SAMEA115104819	uncultured Marinobacter sp.
GCA_963922455.1	CAWUIO000000000	SAMEA115104815	uncultured Microscillaceae bacterium
GCA_963922275.1	CAWUIF000000000	SAMEA115104875	uncultured Moraxellaceae bacterium
GCA_963922425.1	CAWUIZ000000000	SAMEA115104872	uncultured Neomegalonema sp.
GCA_963922725.1	CAWUKL000000000	SAMEA115104806	uncultured Nonlabens sp.
GCA_963922885.1	CAWUKG000000000	SAMEA115104841	uncultured Oceanospirillaceae bacterium
GCA_963922285.1	CAWUIU000000000	SAMEA115104842	uncultured Oligoflexia bacterium
GCA_963922575.1	CAWUII000000000	SAMEA115104869	uncultured Opitutia bacterium
GCA_963922755.1	CAWUKJ000000000	SAMEA115104880	uncultured Parvularcula sp.
GCA_963922235.1	CAWUIJ000000000	SAMEA115104812	uncultured Parvularcula sp.
GCA_963922605.1	CAWUJJ000000000	SAMEA115104825	uncultured Parvularculaceae bacterium
GCA_963922595.1	CAWUIM000000000	SAMEA115104834	uncultured Parvularculaceae bacterium
GCA_963922675.1	CAWUKX000000000	SAMEA115104832	uncultured Pirellulaceae bacterium
GCA_963922475.1	CAWUJY000000000	SAMEA115104810	uncultured Pirellulales bacterium
GCA_963922785.1	CAWUKZ000000000	SAMEA115104885	uncultured Planctomycetaceae bacterium
GCA_963922305.1	CAWUIV000000000	SAMEA115104868	uncultured Planktomarina sp.
GCA_963923005.1	CAWULG000000000	SAMEA115104862	uncultured Pleurocapsa sp.
GCA_963922695.1	CAWUKH000000000	SAMEA115104866	uncultured Pontimonas sp.
GCA_963923045.1	CAWUKU000000000	SAMEA115104867	uncultured Prochlorococcus sp.
GCA_963922945.1	CAWUKC000000000	SAMEA115104833	uncultured Pseudoalteromonas sp.
GCA_963922515.1	CAWUIW000000000	SAMEA115104871	uncultured Rhodobacterales bacterium
GCA_963922505.1	CAWUIG000000000	SAMEA115104856	uncultured Rhodobacterales bacterium
GCA_963922565.1	CAWUIQ000000000	SAMEA115104851	uncultured Rhodobacterales bacterium
GCA_963922395.1	CAWUIX000000000	SAMEA115104852	uncultured Rhodobacterales bacterium
GCA_963922375.1	CAWUJR000000000	SAMEA115104873	uncultured Robbsia sp.
GCA_963922825.1	CAWUKB000000000	SAMEA115104823	uncultured Roseitalea sp.
GCA_963922545.1	CAWUIE000000000	SAMEA115104816	uncultured Saccharospirillaceae bacterium
GCA_963922765.1	CAWULD000000000	SAMEA115104870	uncultured Saprospirales bacterium
GCA_963922555.1	CAWUIY000000000	SAMEA115104800	uncultured Serratia sp.
GCA_963922745.1	CAWUKF000000000	SAMEA115104822	uncultured Sphingomonadales bacterium
GCA_963922295.1	CAWUJA000000000	SAMEA115104874	uncultured Sphingorhabdus sp.
GCA_963922975.1	CAWUKP000000000	SAMEA115104809	uncultured Spongiivirga sp.
GCA_963922715.1	CAWUJT000000000	SAMEA115104799	uncultured Thalassobacter sp.
GCA_963922865.1	CAWUJK000000000	SAMEA115104801	uncultured bacterium
GCA_963923025.1	CAWUKV000000000	SAMEA115104879	uncultured bacterium
GCA_963923035.1	CAWUKT000000000	SAMEA115104805	uncultured bacterium
GCA_963922445.1	CAWUJQ000000000	SAMEA115104882	uncultured bacterium
GCA_963922355.1	CAWUJC000000000	SAMEA115104878	uncultured bacterium
GCA_963922805.1	CAWULC000000000	SAMEA115104881	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA777294 data set (Tracking Genomic Characteristics across Oceanic Provinces: Contrasting Early and Mature Plastic Biofilm Communities).

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