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Accession: PRJNA413893 ID: 413893

Genomes of vertically inherited stinkbug symbionts

Genome sequencing of multiple bacterial symbionts of stinkbugs can help understand their evolution and relevance to their hosts.

Accession	PRJNA413893
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Otero-Bravo A et al., "Multiple concurrent and convergent stages of genome reduction in bacterial symbionts across a stink bug family.", Sci Rep, 2021 Apr 8;11(1):7731 Otero-Bravo A et al., "Cladogenesis and Genomic Streamlining in Extracellular Endosymbionts of Tropical Stink Bugs.", Genome Biol Evol, 2018 Feb 1;10(2):680-693
Submission	Registration date: 11-Oct-2017 Ohio State University
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	92
WGS master	15
Genomic DNA	15
Protein Sequences	2732
Publications
PubMed	2
PMC	2
Other datasets
BioSample	15
Assembly	15

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

5
10
15

Assembly	Level	WGS	Chrs	BioSample	Infraspecies Id	Taxonomy
GCA_002933315.1		PDKT00000000	4	SAMN07774237	SoEE	Candidatus Pantoea edessiphila
GCA_002933345.1		PDKR00000000	4	SAMN07774238	SoEO	Candidatus Pantoea edessiphila
GCA_002933335.1		PDKS00000000	3	SAMN07774236	SoET	Candidatus Pantoea edessiphila
GCA_002933355.1		PDKU00000000	4	SAMN07774235	SoEL	Candidatus Pantoea edessiphila
GCA_009829985.1		SZZU00000000		SAMN11586503	Aalb	Pantoea sp. Aalb
GCA_016642085.1		VOQV00000000		SAMN12497220	Brub	Pantoea sp. Brub
GCA_016643505.1		VOQW00000000		SAMN12497221	Edef	Pantoea sp. Edef
GCA_009830035.1		SZZY00000000		SAMN11586499	Eser	Pantoea sp. Eser
GCA_009830015.1		SZZX00000000		SAMN11586500	Mhis	Pantoea sp. Mhis
GCA_016643525.1		VOQX00000000		SAMN12497222	Morm	Pantoea sp. Morm
GCA_009829915.1		SZZW00000000		SAMN11586501	Nvir	Pantoea sp. Nvir
GCA_016643535.1		VOQY00000000		SAMN12497223	Pent	Pantoea sp. Pent
GCA_009829935.1		SZZV00000000		SAMN11586502	Seng	Pantoea sp. Seng
GCA_009829945.1		SZZT00000000		SAMN11586504	SoEX	Pantoea sp. SoEX
GCA_009830025.1		SZZZ00000000		SAMN11586498	Taur	Pantoea sp. Taur

Supplemental Content

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Assembly
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Full text in PMC
PMC links
Genome
Related Genomes
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
PubMed
PubMed Links
WGS master
Link to WGS master record(s)

LinkOut to external resources

2905909436: Pantoea sp. SoEX [Integrated Microbial Genomes]
2905909436: Pantoea sp. SoEX
Integrated Microbial Genomes
2924510081: Pantoea sp. Seng [Integrated Microbial Genomes]
2924510081: Pantoea sp. Seng
Integrated Microbial Genomes
2904652709: Pantoea sp. Eser [Integrated Microbial Genomes]
2904652709: Pantoea sp. Eser
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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