Bacteria (ID 665156) - BioProject

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Accession: PRJNA665156 ID: 665156

Bacteria

Bacteria Genome sequencing and assembly

Genomes sequences of bacterial strains representatives of the main seed-borne taxa. More...

Accession	PRJNA665156
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Chesneau G et al., "Temporal dynamics of bacterial communities during seed development and maturation.", FEMS Microbiol Ecol, 2020 Nov 26;96(12)
Grants	"Dynamics of bacterial assemblages during seed development" (Grant ID ANR-17-CE20-0009-01, French National Research Agency)
Submission	Registration date: 23-Sep-2020 INRAE
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	137
WGS master	112
Genomic DNA	25
SRA Experiments	6
Protein Sequences	23213
Publications
PubMed	1
PMC	1
Other datasets
BioSample	117
Assembly	117

Assembly details:

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Assembly level

Number of Assemblies

5
16
96
117

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_014841755.1	JACYUM000000000		SAMN16237654	CFBP8757	Aeromicrobium sp. CFBP 8757
GCA_014839555.1	JACYOA000000000		SAMN16237031	CFBP13597	Bacillus sp. CFBP 13597
GCA_014839305.1	JACYNN000000000		SAMN16237467	CFBP13732	Erwinia persicina
GCA_014839215.1	JACYNM000000000		SAMN16237479	CFBP8767	Erwinia persicina
GCA_014839105.1	JACYND000000000		SAMN16237911	CFBP8803	Erwinia persicina
GCA_014838835.1	JACYMQ000000000		SAMN16238309	CFBP8795	Erwinia persicina
GCA_014838825.1	JACYMO000000000		SAMN16238323	CFBP8797	Erwinia persicina
GCA_014839405.1	JACYNS000000000		SAMN16237059	CFBP13605	Frigoribacterium sp. CFBP 13605
GCA_014842245.1	JACYVL000000000		SAMN16237123	CFBP13707	Frigoribacterium sp. CFBP 13707
GCA_014842255.1	JACYVH000000000		SAMN16237134	CFBP13712	Frigoribacterium sp. CFBP 13712
GCA_014841875.1	JACYUR000000000		SAMN16237389	CFBP13729	Frigoribacterium sp. CFBP 13729
GCA_014841545.1	JACYUB000000000		SAMN16237779	CFBP8751	Frigoribacterium sp. CFBP 8751
GCA_014841815.1	JACYUO000000000		SAMN16237571	CFBP8754	Frigoribacterium sp. CFBP 8754
GCA_014841655.1	JACYUH000000000		SAMN16237713	CFBP8759	Frigoribacterium sp. CFBP 8759
GCA_014841435.1	JACYTX000000000		SAMN16237812	CFBP8766	Frigoribacterium sp. CFBP 8766
GCA_014841505.1	JACYUA000000000		SAMN16237783	CFBP13647	Massilia sp. CFBP 13647
GCA_014842025.1	JACYUY000000000		SAMN16237342	CFBP13721	Massilia sp. CFBP 13721
GCA_014839445.1	JACYNW000000000		SAMN16237041	CFBP13617	Microbacterium sp. CFBP 13617
GCA_014841205.1	JACYTV000000000		SAMN16238272	CFBP8790	Microbacterium sp. CFBP 8790
GCA_014841235.1	JACYTT000000000		SAMN16238307	CFBP8794	Microbacterium sp. CFBP 8794
GCA_014839455.1	JACYNU000000000		SAMN16237052	CFBP8801	Microbacterium sp. CFBP 8801
GCA_014842315.1	JACYVK000000000		SAMN16237124	CFBP13708	Oxalobacteraceae sp. CFBP 13708
GCA_014841835.1	JACYUQ000000000		SAMN16237464	CFBP13730	Oxalobacteraceae sp. CFBP 13730
GCA_014841995.1	JACYUX000000000		SAMN16237354	CFBP8753	Oxalobacteraceae sp. CFBP 8753
GCA_014841765.1	JACYUN000000000		SAMN16237644	CFBP8755	Oxalobacteraceae sp. CFBP 8755
GCA_014841595.1	JACYUE000000000		SAMN16237762	CFBP8761	Oxalobacteraceae sp. CFBP 8761
GCA_014841525.1	JACYUC000000000		SAMN16237778	CFBP8763	Oxalobacteraceae sp. CFBP 8763
GCA_014842675.1	JACYVQ000000000		SAMN16237029	CFBP13594	Paenibacillus sp. CFBP 13594
GCA_014838905.1	JACYMV000000000		SAMN16238273	CFBP8791	Pantoea agglomerans
GCA_014838815.1	JACYMT000000000		SAMN16238278	CFBP8800	Pantoea agglomerans
GCA_014838975.1	JACYMS000000000		SAMN16238279	CFBP8792	Pantoea agglomerans
GCA_014839425.1	JACYNT000000000		SAMN16237057	CFBP13616	Pantoea agglomerans
GCA_014839545.1	JACYNZ000000000		SAMN16237032	CFBP13583	Pantoea agglomerans
GCA_014839315.1	JACYNO000000000		SAMN16237466	CFBP13731	Pantoea agglomerans
GCA_014839325.1	JACYNR000000000		SAMN16237131	CFBP13709	Pantoea agglomerans
GCA_014839265.1	JACYNI000000000		SAMN16237858	CFBP13566	Pantoea agglomerans
GCA_014839015.1	JACYNA000000000		SAMN16237914	CFBP8786	Pantoea agglomerans
GCA_014839175.1	JACYNF000000000		SAMN16237909	CFBP8783	Pantoea agglomerans
GCA_014839125.1	JACYNE000000000		SAMN16237910	CFBP8784	Pantoea agglomerans
GCA_014839115.1	JACYNG000000000		SAMN16237903	CFBP13569	Pantoea agglomerans
GCA_014839085.2		4	SAMN16237912	CFBP8785	Pantoea agglomerans
GCA_014842695.2		5	SAMN16236980	CFBP13600	Pantoea agglomerans
GCA_014839525.2		4	SAMN16237033	CFBP13593	Pantoea agglomerans
GCA_014841465.2		7	SAMN16237802	CFBP8774	Pantoea agglomerans
GCA_014839205.2		5	SAMN16237653	CFBP8756	Pantoea agglomerans
GCA_014841365.1	JACYVN000000000		SAMN16237854	CFBP13531	Peribacillus simplex
GCA_014841395.1	JACYTW000000000		SAMN16237824	CFBP13570	Plantibacter sp. CFBP 13570
GCA_014839505.1	JACYNV000000000		SAMN16237042	CFBP8775	Plantibacter sp. CFBP 8775
GCA_014841195.1	JACYTS000000000		SAMN16238397	CFBP8798	Plantibacter sp. CFBP 8798
GCA_014841225.1	JACYTU000000000		SAMN16238287	CFBP8804	Plantibacter sp. CFBP 8804
GCA_014839485.1	JACYNX000000000		SAMN16237039	CFBP13595	Priestia megaterium
GCA_014842705.1	JACYVS000000000		SAMN16236979	CFBP13596	Priestia megaterium
GCA_014841305.1	JACYWW000000000		SAMN16237901	CFBP13575	Pseudomonas coleopterorum
GCA_014842455.1	JACYWZ000000000		SAMN16237062	CFBP13599	Pseudomonas coleopterorum
GCA_014842375.1	JACYWY000000000		SAMN16237070	CFBP13615	Pseudomonas coleopterorum
GCA_014842435.1	JACYXR000000000		SAMN16237065	CFBP13604	Pseudomonas fluorescens
GCA_014842405.1	JACYWM000000000		SAMN16237067	CFBP8781	Pseudomonas fluorescens
GCA_014842575.1	JACYWR000000000		SAMN16237051	CFBP13700	Pseudomonas fluorescens
GCA_014842555.1	JACYWT000000000		SAMN16237046	CFBP13702	Pseudomonas fluorescens
GCA_014842515.1	JACYWQ000000000		SAMN16237054	CFBP8778	Pseudomonas fluorescens
GCA_014842485.1	JACYWN000000000		SAMN16237064	CFBP8780	Pseudomonas fluorescens
GCA_014842475.1	JACYWP000000000		SAMN16237055	CFBP13611	Pseudomonas fluorescens
GCA_014842605.1	JACYWU000000000		SAMN16237045	CFBP8776	Pseudomonas fluorescens
GCA_014842345.1	JACYWL000000000		SAMN16237069	CFBP13703	Pseudomonas fluorescens
GCA_014842335.1	JACYWK000000000		SAMN16237071	CFBP13701	Pseudomonas fluorescens
GCA_014842195.1	JACYVP000000000		SAMN16237135	CFBP13713	Pseudomonas fluorescens
GCA_014841405.1	JACYXO000000000		SAMN16237813	CFBP13573	Pseudomonas fluorescens
GCA_014839025.1	JACYMZ000000000		SAMN16237931	CFBP8787	Pseudomonas fluorescens
GCA_014839035.1	JACYNB000000000		SAMN16237913	CFBP13649	Pseudomonas fluorescens
GCA_014839275.1	JACYNL000000000		SAMN16237480	CFBP8768	Pseudomonas fluorescens
GCA_014839225.1	JACYNJ000000000		SAMN16237857	CFBP13533	Pseudomonas fluorescens
GCA_014839385.1	JACYNQ000000000		SAMN16237140	CFBP13716	Pseudomonas fluorescens
GCA_014838965.1	JACYMX000000000		SAMN16237973	CFBP8788	Pseudomonas fluorescens
GCA_014838915.1	JACYMW000000000		SAMN16238009	CFBP8789	Pseudomonas fluorescens
GCA_014838845.1	JACYMR000000000		SAMN16238286	CFBP8793	Pseudomonas fluorescens
GCA_014838805.1	JACYMP000000000		SAMN16238321	CFBP8796	Pseudomonas fluorescens
GCA_014842015.1	JACYWX000000000		SAMN16237190	CFBP13722	Pseudomonas lurida
GCA_014839365.1	JACYNP000000000		SAMN16237352	CFBP13723	Pseudomonas lutea
GCA_014841805.1	JACYXQ000000000		SAMN16237574	CFBP8769	Pseudomonas putida
GCA_014842725.1	JACYVT000000000		SAMN16236977	CFBP13602	Pseudomonas sp. CFBP 13602
GCA_014842235.1	JACYVJ000000000		SAMN16237132	CFBP13710	Pseudomonas sp. CFBP 13710
GCA_014842265.1	JACYVI000000000		SAMN16237133	CFBP13711	Pseudomonas sp. CFBP 13711
GCA_014842125.1	JACYVE000000000		SAMN16237138	CFBP13715	Pseudomonas sp. CFBP 13715
GCA_014842095.1	JACYVB000000000		SAMN16237175	CFBP13719	Pseudomonas sp. CFBP 13719
GCA_014841915.1	JACYUT000000000		SAMN16237372	CFBP13727	Pseudomonas sp. CFBP 13727
GCA_014841725.1	JACYUK000000000		SAMN16237690	CFBP8758	Pseudomonas sp. CFBP 8758
GCA_014841705.1	JACYUL000000000		SAMN16237655	CFBP8770	Pseudomonas sp. CFBP 8770
GCA_014841695.1	JACYUJ000000000		SAMN16237697	CFBP8771	Pseudomonas sp. CFBP 8771
GCA_014841665.1	JACYUI000000000		SAMN16237710	CFBP8772	Pseudomonas sp. CFBP 8772
GCA_014841625.1	JACYUF000000000		SAMN16237754	CFBP8773	Pseudomonas sp. CFBP 8773
GCA_014841345.1	JACYWJ000000000		SAMN16237876	CFBP13571	Pseudomonas syringae
GCA_014841315.1	JACYXN000000000		SAMN16237826	CFBP13572	Pseudomonas syringae
GCA_014841295.1	JACYWI000000000		SAMN16237900	CFBP13574	Pseudomonas syringae
GCA_014842595.1	JACYWS000000000		SAMN16237050	CFBP8777	Pseudomonas syringae
GCA_014842635.1	JACYXP000000000		SAMN16237030	CFBP13578	Pseudomonas syringae
GCA_014842615.1	JACYWV000000000		SAMN16237043	CFBP13601	Pseudomonas syringae
GCA_014842465.1	JACYWO000000000		SAMN16237056	CFBP8779	Pseudomonas syringae
GCA_014839005.1	JACYMY000000000		SAMN16237943	CFBP8799	Pseudomonas viridiflava
GCA_014838925.1	JACYMU000000000		SAMN16238274	CFBP8802	Pseudomonas viridiflava
GCA_014842165.1	JACYVF000000000		SAMN16237137	CFBP13644	Rhizobium sp. CFBP 13644
GCA_014842115.1	JACYVD000000000		SAMN16237141	CFBP13717	Rhizobium sp. CFBP 13717
GCA_014841925.1	JACYUU000000000		SAMN16237357	CFBP13726	Rhizobium sp. CFBP 13726
GCA_014842035.1	JACYUZ000000000		SAMN16237344	CFBP8752	Rhizobium sp. CFBP 8752
GCA_014841565.1	JACYUD000000000		SAMN16237769	CFBP8762	Rhizobium sp. CFBP 8762
GCA_014892665.1	JADBIA000000000		SAMN16237060	CFBP13603	Sphingomonas sp. CFBP 13603
GCA_014842355.1	JACYVM000000000		SAMN16237122	CFBP13706	Sphingomonas sp. CFBP 13706
GCA_014842205.1	JACYVG000000000		SAMN16237136	CFBP13714	Sphingomonas sp. CFBP 13714
GCA_014842075.1	JACYVA000000000		SAMN16237345	CFBP13720	Sphingomonas sp. CFBP 13720
GCA_014841895.1	JACYUS000000000		SAMN16237374	CFBP13728	Sphingomonas sp. CFBP 13728
GCA_014841795.1	JACYUP000000000		SAMN16237468	CFBP13733	Sphingomonas sp. CFBP 13733
GCA_014841615.1	JACYUG000000000		SAMN16237746	CFBP8760	Sphingomonas sp. CFBP 8760
GCA_014841495.1	JACYTZ000000000		SAMN16237800	CFBP8764	Sphingomonas sp. CFBP 8764
GCA_014841445.1	JACYTY000000000		SAMN16237811	CFBP8765	Sphingomonas sp. CFBP 8765
GCA_014842145.1	JACYVC000000000		SAMN16237142	CFBP13718	Stenotrophomonas sp. CFBP 13718
GCA_014841975.1	JACYUW000000000		SAMN16237355	CFBP13724	Stenotrophomonas sp. CFBP 13724
GCA_014841935.1	JACYUV000000000		SAMN16237356	CFBP13725	Stenotrophomonas sp. CFBP 13725
GCA_014839145.1	JACYNH000000000		SAMN16237897	CFBP8782	Xanthomonas campestris

SRA Data Details

Parameter	Value
Data volume, Gbases	6
Data volume, Mbytes	1656

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Bacteria Genome sequencing and assembly

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