ID 866464 - BioProject

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Accession: PRJEB55166 ID: 866464

EMG produced TPA metagenomics assembly of PRJNA645015 data set (Honeybee gut microbiome).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA645015, and was assembled with metaSPAdes v3. More...

Accession	PRJEB55166
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 5-Aug-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	7169
WGS master	98
Publications
PubMed	1
PMC	1
Other datasets
BioSample	98
Assembly	98

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

98
98

Assembly	WGS	BioSample	Taxonomy
GCA_946482105.1	CAMLQF000000000	SAMEA110701606	Acinetobacter bereziniae
GCA_946482555.1	CAMLRY000000000	SAMEA110701622	Bartonella apis
GCA_946482135.1	CAMLQM000000000	SAMEA110701615	Bartonella apis
GCA_946480505.1	CAMLKB000000000	SAMEA110701647	Bartonella apis
GCA_946481795.1	CAMLOP000000000	SAMEA110701620	Bartonella apis
GCA_946482025.1	CAMLPX000000000	SAMEA110701573	Bartonella apis
GCA_946480975.1	CAMLLS000000000	SAMEA110701600	Bartonella apis
GCA_946482445.1	CAMLRM000000000	SAMEA110701624	Bifidobacterium asteroides
GCA_946481505.1	CAMLNQ000000000	SAMEA110701576	Bifidobacterium asteroides
GCA_946481865.1	CAMLPK000000000	SAMEA110701635	Bifidobacterium asteroides
GCA_946480805.1	CAMLKZ000000000	SAMEA110701613	Bifidobacterium asteroides
GCA_946481635.1	CAMLOI000000000	SAMEA110701657	Bifidobacterium asteroides
GCA_946481945.1	CAMLPO000000000	SAMEA110701584	Bifidobacterium asteroides
GCA_946481685.1	CAMLOT000000000	SAMEA110701649	Bifidobacterium asteroides
GCA_946481785.1	CAMLOJ000000000	SAMEA110701623	Bifidobacterium indicum
GCA_946481975.1	CAMLPQ000000000	SAMEA110701627	Enterobacter asburiae
GCA_946481365.1	CAMLNF000000000	SAMEA110701638	Enterobacter cloacae
GCA_946481955.1	CAMLPR000000000	SAMEA110701577	Enterobacter huaxiensis
GCA_946482255.1	CAMLQV000000000	SAMEA110701597	Enterobacter kobei
GCA_946482205.1	CAMLQT000000000	SAMEA110701571	Enterobacter ludwigii
GCA_946480895.1	CAMLLN000000000	SAMEA110701611	Escherichia coli
GCA_946480405.1	CAMLJH000000000	SAMEA110701646	Frischella perrara
GCA_946481725.1	CAMLOM000000000	SAMEA110701648	Fructobacillus fructosus
GCA_946481925.1	CAMLPS000000000	SAMEA110701580	Gilliamella apicola
GCA_946482435.1	CAMLRN000000000	SAMEA110701588	Gilliamella apicola
GCA_946482525.1	CAMLRW000000000	SAMEA110701589	Gilliamella apicola
GCA_946481805.1	CAMLPD000000000	SAMEA110701583	Gilliamella apicola
GCA_946481885.1	CAMLPJ000000000	SAMEA110701629	Gilliamella apis
GCA_946481015.1	CAMLMO000000000	SAMEA110701598	Hafnia alvei
GCA_946480735.1	CAMLKJ000000000	SAMEA110701618	Klebsiella oxytoca
GCA_946481855.1	CAMLPH000000000	SAMEA110701651	Klebsiella variicola
GCA_946481935.1	CAMLPP000000000	SAMEA110701586	Kluyvera ascorbata
GCA_946482455.1	CAMLRR000000000	SAMEA110701587	Kluyvera cryocrescens
GCA_946480335.1	CAMLJJ000000000	SAMEA110701642	Lactobacillus apis
GCA_946481825.1	CAMLPB000000000	SAMEA110701661	Lactobacillus apis
GCA_946481745.1	CAMLOO000000000	SAMEA110701659	Lactobacillus apis
GCA_946482155.1	CAMLQC000000000	SAMEA110701607	Lactobacillus apis
GCA_946481775.1	CAMLOK000000000	SAMEA110701592	Lactobacillus apis
GCA_946481835.1	CAMLPF000000000	SAMEA110701628	Lactobacillus helsingborgensis
GCA_946482245.1	CAMLQO000000000	SAMEA110701568	Lactobacillus helsingborgensis
GCA_946480775.1	CAMLKH000000000	SAMEA110701612	Lactobacillus helsingborgensis
GCA_946480435.1	CAMLJI000000000	SAMEA110701641	Lactobacillus helsingborgensis
GCA_946481055.1	CAMLLZ000000000	SAMEA110701595	Lactobacillus kimbladii
GCA_946482125.1	CAMLQE000000000	SAMEA110701594	Lactobacillus panisapium
GCA_946481995.1	CAMLPU000000000	SAMEA110701582	Metallosphaera sedula
GCA_946480745.1	CAMLKU000000000	SAMEA110701617	Morganella morganii
GCA_946482275.1	CAMLQW000000000	SAMEA110701604	Providencia rettgeri
GCA_946480375.1	CAMLJX000000000	SAMEA110701644	Serratia marcescens
GCA_946482505.1	CAMLRT000000000	SAMEA110701634	Snodgrassella alvi
GCA_946481845.1	CAMLPG000000000	SAMEA110701585	Snodgrassella alvi
GCA_946482235.1	CAMLQU000000000	SAMEA110701609	Staphylococcus aureus
GCA_946480985.1	CAMLLR000000000	SAMEA110701605	Ventosimonas gracilis
GCA_946481375.1	CAMLNI000000000	SAMEA110701569	uncultured Apibacter sp.
GCA_946481435.1	CAMLNS000000000	SAMEA110701564	uncultured Aquificaceae bacterium
GCA_946480935.1	CAMLLT000000000	SAMEA110701608	uncultured Bartonella sp.
GCA_946482485.1	CAMLRP000000000	SAMEA110701625	uncultured Bartonella sp.
GCA_946481115.1	CAMLMB000000000	SAMEA110701596	uncultured Bartonella sp.
GCA_946481695.1	CAMLON000000000	SAMEA110701660	uncultured Bartonella sp.
GCA_946482225.1	CAMLQN000000000	SAMEA110701593	uncultured Bartonella sp.
GCA_946481595.1	CAMLOG000000000	SAMEA110701656	uncultured Bifidobacterium sp.
GCA_946480455.1	CAMLJO000000000	SAMEA110701645	uncultured Bifidobacterium sp.
GCA_946482265.1	CAMLQQ000000000	SAMEA110701601	uncultured Bifidobacterium sp.
GCA_946480445.1	CAMLJN000000000	SAMEA110701637	uncultured Buttiauxella sp.
GCA_946481645.1	CAMLOS000000000	SAMEA110701640	uncultured Citrobacter sp.
GCA_946481295.1	CAMLLW000000000	SAMEA110701650	uncultured Clostridia bacterium
GCA_946482175.1	CAMLQD000000000	SAMEA110701602	uncultured Commensalibacter sp.
GCA_946482145.1	CAMLQI000000000	SAMEA110701567	uncultured Delftia sp.
GCA_946482065.1	CAMLQA000000000	SAMEA110701616	uncultured Dysgonomonas sp.
GCA_946482475.1	CAMLRQ000000000	SAMEA110701630	uncultured Gilliamella sp.
GCA_946481345.1	CAMLMY000000000	SAMEA110701614	uncultured Gilliamella sp.
GCA_946481985.1	CAMLPT000000000	SAMEA110701639	uncultured Gilliamella sp.
GCA_946481305.1	CAMLMD000000000	SAMEA110701643	uncultured Gilliamella sp.
GCA_946481665.1	CAMLOW000000000	SAMEA110701632	uncultured Gilliamella sp.
GCA_946482015.1	CAMLPW000000000	SAMEA110701626	uncultured Gilliamella sp.
GCA_946482005.1	CAMLPV000000000	SAMEA110701654	uncultured Gilliamella sp.
GCA_946480355.1	CAMLJS000000000	SAMEA110701636	uncultured Gilliamella sp.
GCA_946482095.1	CAMLQH000000000	SAMEA110701574	uncultured Kosakonia sp.
GCA_946481765.1	CAMLOQ000000000	SAMEA110701652	uncultured Lactobacillus sp.
GCA_946481905.1	CAMLPL000000000	SAMEA110701579	uncultured Lactobacillus sp.
GCA_946480875.1	CAMLLH000000000	SAMEA110701603	uncultured Lactobacillus sp.
GCA_946481545.1	CAMLNO000000000	SAMEA110701575	uncultured Lactobacillus sp.
GCA_946480665.1	CAMLKE000000000	SAMEA110701570	uncultured Lactobacillus sp.
GCA_946481915.1	CAMLPM000000000	SAMEA110701578	uncultured Lactobacillus sp.
GCA_946481815.1	CAMLPC000000000	SAMEA110701655	uncultured Lactobacillus sp.
GCA_946481415.1	CAMLNN000000000	SAMEA110701572	uncultured Lactobacillus sp.
GCA_946480955.1	CAMLLQ000000000	SAMEA110701599	uncultured Lactobacillus sp.
GCA_946482425.1	CAMLRO000000000	SAMEA110701653	uncultured Lactobacillus sp.
GCA_946481895.1	CAMLPE000000000	SAMEA110701581	uncultured Lactobacillus sp.
GCA_946481455.1	CAMLNP000000000	SAMEA110701566	uncultured Lactobacillus sp.
GCA_946480795.1	CAMLKT000000000	SAMEA110701610	uncultured Lactobacillus sp.
GCA_946481705.1	CAMLOH000000000	SAMEA110701658	uncultured Lactobacillus sp.
GCA_946480615.1	CAMLKD000000000	SAMEA110701565	uncultured Lactobacillus sp.
GCA_946482465.1	CAMLRL000000000	SAMEA110701631	uncultured Lactobacillus sp.
GCA_946481085.1	CAMLLY000000000	SAMEA110701621	uncultured Lactobacillus sp.
GCA_946481875.1	CAMLPI000000000	SAMEA110701633	uncultured Microbacterium sp.
GCA_946481965.1	CAMLPN000000000	SAMEA110701590	uncultured Neisseriaceae bacterium
GCA_946480885.1	CAMLLK000000000	SAMEA110701591	uncultured Thermoproteales archaeon
GCA_946480835.1	CAMLLC000000000	SAMEA110701619	uncultured Ventosimonas sp.

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EMG produced TPA metagenomics assembly of PRJNA645015 data set (Honeybee gut microbiome).

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