Bacteria (ID 486904) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from BioSample

Accession: PRJNA486904 ID: 486904

Bacteria

Novel species isolated from murine cecal samples

To constructed a metabolic-syndrome-specific gut microbial biobank of ob/ob mouse, extensive bacterial isolatation, cultivation and preservation were performed. More...

Accession	PRJNA486904
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 19-Sep-2018 Chinese Academy of Science
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	11269
WGS master	98
SRA Experiments	24
Protein Sequences	147430
Other datasets
BioSample	187
Assembly	98

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

98
98

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003612555.1	RAZF00000000	SAMN10024794	1XD8-33	Acutalibacter sp. 1XD8-33
GCA_009917525.1	QZDU00000000	SAMN10053186	1XD8-36	Acutalibacter sp. 1XD8-36
GCA_009917565.1	QZEA00000000	SAMN10053175	1xD42-21	Adlercreutzia caecimuris
GCA_009927985.1	QZDZ00000000	SAMN10053177	D2-1X-25	Adlercreutzia muris
GCA_009663785.1	RDBQ00000000	SAMN10240011	D10-15	Akkermansia muciniphila
GCA_009663755.1	RDBS00000000	SAMN10240013	D10-10	Alistipes onderdonkii
GCA_009911575.1	QWKL00000000	SAMN09901053	Z76	Alistipes sp. Z76
GCA_009910895.1	QXWK00000000	SAMN09867717	28	Anaerotruncus colihominis
GCA_009911235.1	QXWZ00000000	SAMN09901045	X69	Anaerotruncus colihominis
GCA_003612655.1	RAZK00000000	SAMN10024787	1XD22-93	Anaerotruncus sp. 1XD22-93
GCA_009917605.1	QZEG00000000	SAMN10053184	1XD42-93	Anaerotruncus sp. 1XD42-93
GCA_009936115.1	QWES00000000	SAMN09901023	80	Anaerotruncus sp. 80
GCA_009936075.1	QWER00000000	SAMN09901024	X29	Anaerotruncus sp. X29
GCA_003612265.1	RAYC00000000	SAMN10024829	c-21	Bacillus thuringiensis
GCA_003671855.1	RAZM00000000	SAMN10024785	0.1X-D8-26	Bacteroides acidifaciens
GCA_003612665.1	RAZL00000000	SAMN10024786	0.1XD42-1	Bacteroides ovatus
GCA_003612445.1	RAYV00000000	SAMN10024806	WYJ21-P61	Bifidobacterium pseudolongum
GCA_009911435.1	QXXI00000000	SAMN09901029	22-20	Bifidobacterium pseudolongum
GCA_003669085.1	RAYA00000000	SAMN10024831	1XD8-22	Butyricicoccus sp. 1XD8-22
GCA_009911355.1	QXXE00000000	SAMN09901038	9	Clostridiaceae bacterium
GCA_009911335.1	QXXD00000000	SAMN09901039	524-25	Clostridiaceae bacterium
GCA_009911305.1	QXXC00000000	SAMN09901040	1XD21-72	Clostridiaceae bacterium
GCA_009911255.1	QXXB00000000	SAMN09901041	1XD21-84	Clostridiaceae bacterium
GCA_009911105.1	QXWS00000000	SAMN09901060	1XD21-30	Clostridiaceae bacterium
GCA_009911065.1	QXWR00000000	SAMN09901061	1XD21-29	Clostridiaceae bacterium
GCA_009911365.1	QXXF00000000	SAMN09901036	16	Clostridiales bacterium
GCA_003611795.1	RAYJ00000000	SAMN10024822	28-X28	Clostridium paraputrificum
GCA_003611835.1	RAYN00000000	SAMN10024815	1xD42-85	Clostridium sp. 1xD42-85
GCA_009911595.1	QWKG00000000	SAMN09901046	OB.20	Colidextribacter sp. OB.20
GCA_003611765.1	RAYH00000000	SAMN10024824	C-45	Cutibacterium acnes
GCA_009936045.1	QWEQ00000000	SAMN09901025	1XD21-10	Emergencia sp. 1XD21-10
GCA_009917315.1	QWLG00000000	SAMN09901304	J2	Enterococcus asini
GCA_009910555.1	QXXM00000000	SAMN09901020	EF	Enterococcus faecalis
GCA_009911695.1	QWKK00000000	SAMN09901030	P55	Enterorhabdus sp. P55
GCA_009663665.1	RDBT00000000	SAMN10240014	D5-21	Faecalicatena contorta
GCA_009911035.1	QXWO00000000	SAMN09901066	1XD21-87	Lachnospiraceae bacterium
GCA_009911195.1	QXWV00000000	SAMN09901057	526-35	Lachnospiraceae bacterium
GCA_009911185.1	QXWW00000000	SAMN09901049	X68	Lachnospiraceae bacterium
GCA_009911175.1	QXWX00000000	SAMN09901048	1XD21-71	Lachnospiraceae bacterium
GCA_009911155.1	QXWU00000000	SAMN09901058	1XD21-15	Lachnospiraceae bacterium
GCA_009911135.1	QXWT00000000	SAMN09901059	1XD21-12	Lachnospiraceae bacterium
GCA_009911505.1	QXXL00000000	SAMN09901026	MGB1	Lachnospiraceae bacterium
GCA_009911455.1	QXXK00000000	SAMN09901027	1XD21-19	Lachnospiraceae bacterium
GCA_009911465.1	QXXJ00000000	SAMN09901028	1XD21-79	Lachnospiraceae bacterium
GCA_009911275.1	QXWY00000000	SAMN09901047	X54	Lachnospiraceae bacterium
GCA_009663775.1	RDBR00000000	SAMN10240012	0.1XD8-4	Lactobacillus sp. 0.1XD8-4
GCA_009663675.1	RDBV00000000	SAMN10240018	321-5	Lactobacillus taiwanensis
GCA_004125855.1	QZFR00000000	SAMN10053190	C-30	Ligilactobacillus murinus
GCA_003576085.1	QWMU00000000	SAMN09901708	510-9	Ligilactobacillus murinus
GCA_009911495.1	QXXN00000000	SAMN09901019	510-9	Ligilactobacillus murinus
GCA_009935955.1	QWEN00000000	SAMN09901043	M3	Muribaculaceae bacterium M3
GCA_009911605.1	QWKF00000000	SAMN09901050	S4	Muribaculaceae bacterium S4
GCA_009911555.1	QWKE00000000	SAMN09901051	Z1	Muribaculaceae bacterium Z1
GCA_009911675.1	QWKJ00000000	SAMN09901034	59	Neglectibacter sp. 59
GCA_009917365.1	QWLE00000000	SAMN09901306	X4	Neglectibacter sp. X4
GCA_009936035.1	QWEO00000000	SAMN09901035	X58	Neglectibacter sp. X58
GCA_009935865.1	QWEL00000000	SAMN09901054	Z80	Odoribacter sp. Z80
GCA_003671805.1	RAYI00000000	SAMN10024823	8-P5	Parabacteroides distasonis
GCA_009911405.1	QXXG00000000	SAMN09901032	X5	Parabacteroides distasonis
GCA_003670235.1	RAZN00000000	SAMN10024784	0.1X-D42-15	Parabacteroides goldsteinii
GCA_009911535.1	QWKD00000000	SAMN09901056	526-21	Parabacteroides goldsteinii
GCA_003670185.1	RAYG00000000	SAMN10024825	CH2-D42-20	Parabacteroides sp. CH2-D42-20
GCA_003612395.1	RAYQ00000000	SAMN10024811	D8-82	Parablautia intestinalis
GCA_009917485.1	QZDT00000000	SAMN10053188	D42-62	Parablautia muri
GCA_009911015.1	QXWL00000000	SAMN09901069	0.1XD21-62	Phocaeicola sartorii
GCA_009935845.1	QWEK00000000	SAMN09901055	524-17	Pseudoflavonifractor sp. 524-17
GCA_009911645.1	QWKI00000000	SAMN09901037	60	Pseudoflavonifractor sp. 60
GCA_009910975.1	QXWN00000000	SAMN09901067	1XD21-88	Rodentibacter pneumotropicus
GCA_009663655.1	RDBU00000000	SAMN10240016	D2-15	Romboutsia ilealis
GCA_009917385.1	QWLJ00000000	SAMN09901301	1XD42-34	Roseburia sp. 1XD42-34
GCA_003612565.1	RAZG00000000	SAMN10024793	1XD42-69	Roseburia sp. 1XD42-69
GCA_009911265.1	QXXA00000000	SAMN09901042	583	Senegalia massiliensis
GCA_009911045.1	QXWP00000000	SAMN09901065	1XD21-27	Staphylococcus warneri
GCA_009935875.1	QWEM00000000	SAMN09901052	TS3	Turicibacter sp. TS3
GCA_003612405.1	RAYR00000000	SAMN10024810	0.1xD8-71	bacterium 0.1xD8-71
GCA_009917555.1	QZDX00000000	SAMN10053181	1XD21-13	bacterium 1XD21-13
GCA_003669055.1	RAYB00000000	SAMN10024830	1XD21-70	bacterium 1XD21-70
GCA_003612625.1	RAZJ00000000	SAMN10024788	1XD42-1	bacterium 1XD42-1
GCA_003612585.1	RAZH00000000	SAMN10024792	1XD42-54	bacterium 1XD42-54
GCA_009917545.1	QZDW00000000	SAMN10053183	1XD42-76	bacterium 1XD42-76
GCA_003612415.1	RAYU00000000	SAMN10024807	1XD42-8	bacterium 1XD42-8
GCA_009917505.1	QZDV00000000	SAMN10053185	1XD42-94	bacterium 1XD42-94
GCA_003611955.1	RAZE00000000	SAMN10024795	1XD8-76	bacterium 1XD8-76
GCA_003612335.1	RAYO00000000	SAMN10024814	1xD42-67	bacterium 1xD42-67
GCA_003611805.1	RAYM00000000	SAMN10024816	1xD42-87	bacterium 1xD42-87
GCA_009917455.1	QZDS00000000	SAMN10053189	1xD8-48	bacterium 1xD8-48
GCA_003612355.1	RAYK00000000	SAMN10024819	1xD8-6	bacterium 1xD8-6
GCA_003612525.1	RAZD00000000	SAMN10024797	C-53	bacterium C-53
GCA_003612515.1	RAZB00000000	SAMN10024799	D16-34	bacterium D16-34
GCA_003611745.1	RAYF00000000	SAMN10024826	D16-36	bacterium D16-36
GCA_003612485.1	RAZA00000000	SAMN10024800	D16-50	bacterium D16-50
GCA_003612285.1	RAYE00000000	SAMN10024827	D16-51	bacterium D16-51
GCA_003611905.1	RAYZ00000000	SAMN10024801	D16-54	bacterium D16-54
GCA_003611875.1	RAYY00000000	SAMN10024802	D16-56	bacterium D16-56
GCA_003612315.1	RAYD00000000	SAMN10024828	D16-59	bacterium D16-59
GCA_009917445.1	QZEE00000000	SAMN10053192	D16-76	bacterium D16-76
GCA_003671795.1	RAYW00000000	SAMN10024804	J10	bacterium J10(2018)
GCA_009917405.1	QZED00000000	SAMN10053194	c-19	bacterium c-19

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	603

BioProject

Result Filters

Display Settings:

Send to:

Links from BioSample

Bacteria

Novel species isolated from murine cecal samples

Supplemental Content

Related information

LinkOut to external resources

Recent activity