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Accession: PRJNA788759 ID: 788759

Campylobacter sp.

GenomeTrakr Project: New York State Department of Agriculture and Markets (NYAG)

See Genome Information for Campylobacter
Whole-genome sequencing of pure-cultured Campylobacter species as part of the New York State Department of Agriculture and Markets surveillance effort for both the US Food and Drug Administration's (FDA) GenomeTrakr network and Centers for Disease Control and Prevention (CDC) PulseNet network whole genome sequencing (WGS) surveillance efforts for the rapid detection and traceback of foodborne pathogens.
AccessionPRJNA788759
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismCampylobacter sp.[Taxonomy ID: 205]
Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter sp.
SubmissionRegistration date: 4-Jan-2022
GenomeTrakr Project: New York Department of Agriculture
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)79
SRA Experiments88
Other datasets
BioSample88
Assembly79
Assembly details:
Assembly levelNumber of Assemblies
79
79
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_031437945.1ContigABMGHX000000000SAMN32679398
U1014c
GCA_021361305.1ContigABENPP000000000SAMN24271454
U1002c
GCA_021757505.1ContigABEWMV000000000SAMN25337454
U673c
GCA_021725395.1ContigABEVSS000000000SAMN25337463
U1522c
GCA_021725335.1ContigABEVSR000000000SAMN25337492
U122c
GCA_021725315.1ContigABEVSQ000000000SAMN25337490
U1405c
GCA_021725295.1ContigABEVSK000000000SAMN25337477
U876c
GCA_021724855.1ContigABEVRW000000000SAMN25337452
U1520c
GCA_021724835.1ContigABEVRS000000000SAMN25337450
U1041c
GCA_021724815.1ContigABEVRT000000000SAMN25337451
U1407c
GCA_021724795.1ContigABEVRX000000000SAMN25337448
U968c
GCA_021724775.1ContigABEVRU000000000SAMN25337455
U1664c
GCA_021724175.1ContigABEVQV000000000SAMN25337478
U1690c
GCA_021724155.1ContigABEVQR000000000SAMN25337457
U125c
GCA_021724735.1ContigABEVRQ000000000SAMN25337458
U820c
GCA_021724715.1ContigABEVRR000000000SAMN25337462
U1103c
GCA_021724695.1ContigABEVRN000000000SAMN25337461
U756c
GCA_021724665.1ContigABEVRP000000000SAMN25337456
U131c
GCA_021724655.1ContigABEVRO000000000SAMN25337491
U1446c
GCA_021724615.1ContigABEVRM000000000SAMN25337479
U1403c
GCA_021714795.1ContigABEVKI000000000SAMN25337465
U1467c
GCA_021715155.1ContigABEVLP000000000SAMN25337449
U763c
GCA_021714995.1ContigABEVMD000000000SAMN25337464
U1498c
GCA_021715015.1ContigABEVLJ000000000SAMN25337459
U123c
GCA_021663855.2ContigABEUNQ000000000SAMN25248600
U1145c
GCA_021658275.1ContigABEUJW000000000SAMN25247691
U706c
GCA_021660355.1ContigABEUKM000000000SAMN25247690
U1197c
GCA_021660335.1ContigABEUKJ000000000SAMN25247702
U719c
GCA_021660315.1ContigABEUKS000000000SAMN25247701
U764c_b
GCA_021660295.1ContigABEUKL000000000SAMN25247694
U1678c
GCA_021660275.1ContigABEUKK000000000SAMN25247695
U648c
GCA_021660255.1ContigABEUKH000000000SAMN25247710
U855c
GCA_021660235.1ContigABEUKI000000000SAMN25247705
U976c
GCA_021660215.1ContigABEUKF000000000SAMN25247700
U1490c
GCA_021660195.1ContigABEUKG000000000SAMN25247696
U1142c
GCA_021660175.1ContigABEUKE000000000SAMN25247699
U757c
GCA_021664315.1ContigABEUOM000000000SAMN25247711
U1455c
GCA_021664295.1ContigABEUOL000000000SAMN25247698
U1465c
GCA_021664275.1ContigABEUON000000000SAMN25247703
U120c
GCA_021664255.1ContigABEUOJ000000000SAMN25247697
U969c
GCA_021664235.1ContigABEUOG000000000SAMN25248583
U679c
GCA_021664215.1ContigABEUOI000000000SAMN25248599
U874c
GCA_021664195.1ContigABEUOK000000000SAMN25248589
U896c
GCA_021664175.1ContigABEUOF000000000SAMN25248597
U1105c
GCA_021664155.1ContigABEUOE000000000SAMN25248594
U114c
GCA_021664135.1ContigABEUOC000000000SAMN25248590
U1680c
GCA_021664115.1ContigABEUOD000000000SAMN25248598
U1494c
GCA_021664095.1ContigABEUOH000000000SAMN25248591
U1187c
GCA_021664075.1ContigABEUOA000000000SAMN25248586
U682c
GCA_021664055.1ContigABEUOB000000000SAMN25248584
U1412c
GCA_021664035.1ContigABEUNZ000000000SAMN25248596
U1460c
GCA_021663995.1ContigABEUNY000000000SAMN25248587
U760c
GCA_021664005.1ContigABEUNW000000000SAMN25248595
U1482c
GCA_021663975.1ContigABEUNV000000000SAMN25248588
U863c
GCA_021663955.1ContigABEUNS000000000SAMN25248592
U1515c
GCA_021663935.1ContigABEUNX000000000SAMN25248603
U710c
GCA_021663915.1ContigABEUNR000000000SAMN25248593
U672c
GCA_021663895.1ContigABEUNT000000000SAMN25248585
U1453c
GCA_021663875.1ContigABEUNU000000000SAMN25248601
U1499c
GCA_021663835.1ContigABEUNL000000000SAMN25248605
U654c
GCA_021663815.1ContigABEUNJ000000000SAMN25248604
U1114c
GCA_021663795.1ContigABEUNP000000000SAMN25248606
U1420c
GCA_021663775.1ContigABEUNM000000000SAMN25248607
U130c
GCA_021663755.1ContigABEUNO000000000SAMN25248609
U1083c
GCA_021661135.1ContigABEULJ000000000SAMN25247704
U667c
GCA_021661115.1ContigABEULG000000000SAMN25247712
U685c
GCA_021660155.1ContigABEUKC000000000SAMN25247709
U1133c
GCA_021660115.1ContigABEUKB000000000SAMN25247713
U1120c
GCA_021660095.1ContigABEUKD000000000SAMN25247706
U1095c
GCA_021552475.1ContigABESRU000000000SAMN25161121
U113c
GCA_022045325.1ContigABFAFP000000000SAMN25705791
U870c
GCA_022045305.1ContigABFAFM000000000SAMN25706221
U1445c
GCA_022045385.1ContigABFAFO000000000SAMN25706220
U230c
GCA_032798705.1ContigABNZYK000000000SAMN37859291
23B10494
GCA_031958465.1ContigABMXUH000000000SAMN36810335
23B07256-1
GCA_032088075.1ContigABNAAV000000000SAMN37546133
23B09769
GCA_031908045.1ContigABMWHL000000000SAMN36873498
23B07796
GCA_039503945.1ContigABRZVV000000000SAMN41217684
24B04252-2
GCA_039503965.1ContigABRZVZ000000000SAMN41217683
24B04252-1
SRA Data Details
ParameterValue
Data volume, Gbases17
Data volume, Mbytes8618

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