U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from BioSample

Accession: PRJNA222257 ID: 222257

Lactobacillus

Lactobacillus Multispecies

See Genome Information for Lactiplantibacillus fabifermentans
Genomic characterization of the genus Lactobacillus
AccessionPRJNA222257
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismLactobacillus[Taxonomy ID: 1578]
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
PublicationsSun Z et al., "Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera.", Nat Commun, 2015 Sep 29;6:8322
SubmissionRegistration date: 6-Nov-2015
Shanghai Majorbio
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20009
WGS master199
SRA Experiments162
Protein Sequences417671
Publications
PubMed1
PMC1
Other datasets
BioSample200
Assembly199
Assembly details:
Assembly levelNumber of Assemblies
157
42
199
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001436375.1ScaffoldAZGA00000000SAMN02369442
DSM 18527
GCA_001436185.1ScaffoldAYYS00000000SAMN02369500
DSM 20533
GCA_001434555.1ScaffoldAZCV00000000SAMN02369421
DSM 20534
GCA_001433825.1ScaffoldAZCK00000000SAMN02369503
DSM 12361
GCA_001435995.1ScaffoldAYYQ00000000SAMN02369466
DSM 23829
GCA_001437015.1ScaffoldJQBO00000000SAMN02797803
DSM 20586
GCA_001437085.1ScaffoldJQBS00000000SAMN02797805
DSM 20623
GCA_001437035.1ScaffoldJQBU00000000SAMN02797806
DSM 20722
GCA_001437315.1ScaffoldJQBG00000000SAMN02797801
DSM 20342
GCA_001438765.1ScaffoldJQBV00000000SAMN02797807
DSM 20730
GCA_001434745.1ScaffoldAZDQ00000000SAMN02369426
DSM 20249
GCA_001434855.1ScaffoldAZDY00000000SAMN02369437
DSM 19674
GCA_001434585.1ContigAZDB00000000SAMN02369486
JCM 15951
GCA_001438825.1ScaffoldJQCK00000000SAMN02797794
LMG 23699
GCA_001434775.1ContigAZDR00000000SAMN02369427
DSM 20184
GCA_001435505.1ScaffoldAZDO00000000SAMN02369448
JCM 17355
GCA_001438805.1ContigJQCF00000000SAMN02797788
DSM 24716
GCA_001435445.1ScaffoldAZDH00000000SAMN02369457
DSM 13961
GCA_001434275.1ScaffoldAZEZ00000000SAMN02369489
DSM 14500
GCA_001435815.1ContigAZFV00000000SAMN02369491
DSM 16982
GCA_001435555.1ScaffoldAZDZ00000000SAMN02369463
DSM 19682
GCA_001434985.1ScaffoldAZES00000000SAMN02369493
DSM 13238
GCA_001434665.1ScaffoldAZDG00000000SAMN02369431
DSM 20183
GCA_001434295.1ContigAZFA00000000SAMN02369386
DSM 14857
GCA_001434695.1ContigAZDI00000000SAMN02369425
DSM 15638
GCA_001436645.1ContigAYZI00000000SAMN02369447
DSM 22689
GCA_001437175.1ScaffoldJQAS00000000SAMN02797768
ATCC 27394
GCA_001436935.1ScaffoldJQBI00000000SAMN02797779
DSM 20350
GCA_001436985.1ScaffoldJQBN00000000SAMN02797782
DSM 20571
GCA_001434095.1ContigAZDS00000000SAMN02369432
DSM 20203
GCA_001438685.1ScaffoldJQBT00000000SAMN02797783
DSM 20690
GCA_001436035.1ScaffoldAYYM00000000SAMN02369496
DSM 20451
GCA_001438695.1ScaffoldJQBH00000000SAMN02797802
DSM 20349
GCA_001435135.1ContigAZFF00000000SAMN02369495
DSM 15814
GCA_001437435.1ScaffoldJQCB00000000SAMN02797786
DSM 22696
GCA_001436605.1ScaffoldAYZL00000000SAMN02369446
DSM 23037
GCA_001436965.1ScaffoldJQBL00000000SAMN02797780
DSM 20405
GCA_001436115.1ContigAYZQ00000000SAMN02369393
DSM 23927
GCA_001436615.1ScaffoldAYZJ00000000SAMN02369434
DSM 22697
GCA_001433735.1ScaffoldAZCO00000000SAMN02369372
DSM 20011
GCA_001435035.1ScaffoldAZEU00000000SAMN02369461
DSM 13343
GCA_001434705.1ScaffoldAZDJ00000000SAMN02369462
JCM 17158
GCA_001435155.1ScaffoldAZFJ00000000SAMN02369409
DSM 15945
GCA_001436485.1ScaffoldAYYJ00000000SAMN02369371
DSM 20258
GCA_001436385.1ContigAZGH00000000SAMN02369433
DSM 5622
GCA_001435405.1ScaffoldAZCQ00000000SAMN02369512
DSM 20021
GCA_001437465.1ScaffoldJQCE00000000SAMN02797787
DSM 24301
GCA_001436225.1ScaffoldAYYO00000000SAMN02369377
DSM 20505
GCA_001436135.1ScaffoldAYZK00000000SAMN02369479
DSM 22698
GCA_001433745.1ScaffoldAZCT00000000SAMN02369511
DSM 20178
GCA_001435215.1ScaffoldAZFR00000000SAMN02369470
DSM 16365
GCA_000498955.2ScaffoldAYGX00000000SAMN02369445
DSM 21115
GCA_001435655.1ScaffoldAZEO00000000SAMN02369508
DSM 10667
GCA_001433755.1ScaffoldAZCU00000000SAMN02369484
DSM 20314
GCA_001434175.1ScaffoldAZEJ00000000SAMN02369435
CGMCC 1.2437
GCA_001436855.1ScaffoldJQAW00000000SAMN02797770
DSM 13273
GCA_001438845.1ScaffoldJQCL00000000SAMN02797795
LMG 26013
GCA_001436775.1ScaffoldAYZC00000000SAMN02369436
DSM 20749
GCA_001433895.1ScaffoldAZCS00000000SAMN02369388
DSM 20079
GCA_001435665.1ContigAZEP00000000SAMN02369499
DSM 11664
GCA_001433985.1ScaffoldAZCM00000000SAMN02369422
DSM 20531
GCA_001437365.1ScaffoldJQBQ00000000SAMN02797775
DSM 16698
GCA_001434005.1ScaffoldAZCW00000000SAMN02369387
DSM 20584
GCA_001433875.1ScaffoldAZCR00000000SAMN02369483
DSM 20074
GCA_001434635.1ScaffoldAZDE00000000SAMN02369369
DSM 20072
GCA_001435795.1ScaffoldAZFL00000000SAMN02369368
DSM 15996
GCA_001437485.1ScaffoldJQCG00000000SAMN02797789
DSM 26046
GCA_001437195.1ScaffoldJQAV00000000SAMN02797778
DSM 20081
GCA_001434815.1ScaffoldAZDU00000000SAMN02369379
DSM 19284
GCA_001434975.1ScaffoldAZEL00000000SAMN02369396
DSM 10532
GCA_001436575.1ContigAYZO00000000SAMN02369397
DSM 23908
GCA_001434515.1ScaffoldAZGI00000000SAMN02369398
DSM 5661
GCA_001434945.1ScaffoldAZEK00000000SAMN02369370
CGMCC 1.1877
GCA_001437535.1ScaffoldJQCJ00000000SAMN02797793
LMG 22464
GCA_001436125.1ScaffoldAYZP00000000SAMN02369400
DSM 23910
GCA_001435015.1ContigAZET00000000SAMN02369401
DSM 13335
GCA_001435325.1ScaffoldAZGN00000000SAMN02369403
DSM 6629
GCA_001436455.1ScaffoldAYYU00000000SAMN02369404
DSM 20557
GCA_001433975.1ContigAZCY00000000SAMN02369381
ATCC 33200
GCA_001434335.1ScaffoldAZFM00000000SAMN02369405
DSM 16043
GCA_001434195.1ScaffoldAZEM00000000SAMN02369454
DSM 10550
GCA_001435275.1ScaffoldAZGG00000000SAMN02369453
DSM 5016
GCA_001434435.1ScaffoldAZFU00000000SAMN02369418
DSM 16761
GCA_001433915.1ContigAYZN00000000SAMN02369411
DSM 23907
GCA_001435695.1ScaffoldAZFB00000000SAMN02369382
DSM 15354
GCA_001436805.1ScaffoldJQAT00000000SAMN02797769
ATCC BAA-66
GCA_001437205.1ContigJQAZ00000000SAMN02797771
DSM 13344
GCA_001436695.1ScaffoldAYZG00000000SAMN02369478
DSM 21401
GCA_001436305.1ContigAZFO00000000SAMN02369416
DSM 16047
GCA_001437565.1ScaffoldJQCM00000000SAMN02797796
LMG 7760
GCA_001438885.1ScaffoldJQCP00000000SAMN02797791
DSM 7090
GCA_001435835.1ScaffoldAZFX00000000SAMN02369374
DSM 17758
GCA_001436095.1ScaffoldAYYK00000000SAMN02369443
DSM 20335
GCA_001435495.1ScaffoldAZDL00000000SAMN02369367
DSM 20019
GCA_001435065.1ScaffoldAZEX00000000SAMN02369428
DSM 14340
GCA_001436415.1ScaffoldAYZB00000000SAMN02369450
DSM 20719
GCA_001435715.1ScaffoldAZFG00000000SAMN02369430
DSM 15831
GCA_001434065.1ContigAZDN00000000SAMN02369509
DSM 20017
GCA_001434735.1ContigAZDM00000000SAMN02369438
DSM 20057
GCA_001434255.1ScaffoldAZEY00000000SAMN02369444
DSM 14421
GCA_001435875.1ScaffoldAZFY00000000SAMN02369501
DSM 18382
GCA_001434655.1ContigAZDF00000000SAMN02369502
DSM 20176
GCA_001436175.1ScaffoldAYYV00000000SAMN02369455
DSM 20587
GCA_001434135.1ContigAZEB00000000SAMN02369458
DSM 19906
GCA_001434145.1ScaffoldAZED00000000SAMN02369465
DSM 19908
GCA_001435315.1ScaffoldAZGK00000000SAMN02369410
DSM 5707
GCA_001437335.1ScaffoldJQBJ00000000SAMN02797773
DSM 15352
GCA_001435895.1ScaffoldAZFZ00000000SAMN02369507
DSM 18390
GCA_001434215.1ScaffoldAZEN00000000SAMN02369468
DSM 10551
GCA_001436255.1ScaffoldAZEI00000000SAMN02369472
DSM 19907
GCA_001436555.1ScaffoldAYZR00000000SAMN02369415
DSM 24302
GCA_001435575.1ContigAZEA00000000SAMN02369477
DSM 19904
GCA_001434835.1ScaffoldAZDV00000000SAMN02369485
DSM 19394
GCA_001433855.1ScaffoldAZCP00000000SAMN02369420
DSM 20054
GCA_001434395.1ScaffoldAZFS00000000SAMN02369488
DSM 16381
GCA_001435525.1ScaffoldAZDP00000000SAMN02369459
JCM 16448
GCA_001434785.1ScaffoldAZDT00000000SAMN02369490
DSM 19117
GCA_001434055.1ContigAZCZ00000000SAMN02369467
ATCC 53295
GCA_001437515.1ScaffoldJQCI00000000SAMN02797792
LMG 11984
GCA_001437125.1ScaffoldJQCA00000000SAMN02797785
DSM 22467
GCA_001436675.1ScaffoldAYZH00000000SAMN02369473
DSM 21775
GCA_001435095.1ScaffoldAZFC00000000SAMN02369497
DSM 15429
GCA_001434115.1ScaffoldAZDW00000000SAMN02369498
DSM 19395
GCA_001435755.1ScaffoldAZFI00000000SAMN02369424
DSM 15836
GCA_001436945.1ScaffoldJQBK00000000SAMN02797774
DSM 15353
GCA_001436215.1ScaffoldAYYP00000000SAMN02369373
DSM 20509
GCA_001434535.1ScaffoldAYYW00000000SAMN02369389
DSM 20602
GCA_001434405.1ScaffoldAZFT00000000SAMN02369391
DSM 16634
GCA_001435375.1ScaffoldAYYZ00000000SAMN02369423
DSM 20653
GCA_001436315.1ScaffoldAYZA00000000SAMN02369392
DSM 20655
GCA_001438785.1ScaffoldJQBZ00000000SAMN02797784
DSM 22408
GCA_001435735.1ScaffoldAZFH00000000SAMN02369395
DSM 15833
GCA_001434455.1ScaffoldAZGD00000000SAMN02369399
DSM 18933
GCA_001436015.1ScaffoldAYYN00000000SAMN02369407
DSM 20452
GCA_001433815.1ContigAZCL00000000SAMN02369471
KCTC 13174
GCA_001438865.1ScaffoldJQCN00000000SAMN02797797
NBRC 103219
GCA_001436475.1ContigAYYL00000000SAMN02369384
DSM 20403
GCA_001435165.1ContigAZFP00000000SAMN02369413
DSM 16049
GCA_001435955.1ContigAYYT00000000SAMN02369414
DSM 20555
GCA_001435475.1ContigAZDK00000000SAMN02369390
DSM 16041
GCA_001435055.1ScaffoldAZEW00000000SAMN02369394
DSM 14060
GCA_001435245.1ScaffoldAZGC00000000SAMN02369380
DSM 18793
GCA_001436835.1ScaffoldJQAU00000000SAMN02797777
DSM 20055
GCA_001436045.1ScaffoldAZER00000000SAMN02369487
DSM 13145
GCA_001434365.1ScaffoldAZFN00000000SAMN02369419
DSM 16045
GCA_001435775.1ScaffoldAZFK00000000SAMN02369402
DSM 15946
GCA_001437235.1ScaffoldJQBA00000000SAMN02797772
DSM 14792
GCA_001436025.1ContigAZEQ00000000SAMN02369406
DSM 13345
GCA_001434465.1ContigAZGE00000000SAMN02369408
DSM 4864
GCA_001435935.1ScaffoldAZGM00000000SAMN02369492
DSM 6035
GCA_001435345.1ScaffoldAZGO00000000SAMN02369494
DSM 8475
GCA_001434615.1ScaffoldAZDD00000000SAMN02369412
DSM 20016
GCA_001437055.1ScaffoldJQBW00000000SAMN02797776
DSM 17896
GCA_001435915.1ScaffoldAZGL00000000SAMN02369417
DSM 5837
GCA_001436755.1ScaffoldAYZD00000000SAMN02369378
DSM 21051
GCA_001436735.1ScaffoldAYZE00000000SAMN02369439
DSM 21116
GCA_001434915.1ScaffoldAZEF00000000SAMN02369440
DSM 19910
GCA_001435235.1ScaffoldAZGB00000000SAMN02369449
DSM 18630
GCA_001434845.1ScaffoldAZDX00000000SAMN02369452
DSM 19519
GCA_001436535.1ScaffoldAYYH00000000SAMN02369460
DSM 20444
GCA_001437155.1ScaffoldJQAR00000000SAMN02797767
ATCC 27304
GCA_001434225.1ScaffoldAZEV00000000SAMN02369505
DSM 13675
GCA_001436275.1ScaffoldAZEH00000000SAMN02369506
DSM 19972
GCA_001435195.1ScaffoldAZFQ00000000SAMN02369510
DSM 16230
GCA_001436705.1ScaffoldAYZF00000000SAMN02369475
DSM 21376
GCA_001434935.1ScaffoldAZEG00000000SAMN02369480
DSM 19971
GCA_001435395.1ScaffoldAYYX00000000SAMN02369481
DSM 20605
GCA_001434575.1ScaffoldAZDA00000000SAMN02369366
DSM 20003
GCA_001433765.1ScaffoldAZCN00000000SAMN02369482
DSM 20001
GCA_001435425.1ScaffoldAZDC00000000SAMN02369375
DSM 20004
GCA_001436505.1ScaffoldAYYI00000000SAMN02369383
DSM 20253
GCA_001437585.1ScaffoldJQCO00000000SAMN02797808
DSM 7084
GCA_001437505.1ScaffoldJQCH00000000SAMN02797790
DSM 26202
GCA_001434315.1ScaffoldAZFE00000000SAMN02369429
DSM 15707
GCA_001434475.1ContigAZGF00000000SAMN02369476
DSM 5007
GCA_001436295.1ScaffoldAYYY00000000SAMN02369385
DSM 20634
GCA_001436795.1ContigJQAQ00000000SAMN02797809
AS1.2696
GCA_001437115.1ScaffoldJQCC00000000SAMN02797813
DSM 19927
GCA_001437605.1ScaffoldJQCQ00000000SAMN02797819
DSM 23026
GCA_001438655.1ContigJQBR00000000SAMN02797811
DSM 17757
GCA_001436905.1ScaffoldJQBB00000000SAMN02797810
DSM 14800
GCA_001437255.1ContigJQBD00000000SAMN02797815
DSM 20331
GCA_001437405.1ContigJQBY00000000SAMN02797818
DSM 22301
GCA_001438725.1ContigJQBC00000000SAMN02797814
DSM 20285
GCA_001437285.1ContigJQBF00000000SAMN02797817
DSM 20336
GCA_001437075.1ContigJQBX00000000SAMN02797812
DSM 18001
GCA_001436325.1ScaffoldAZFW00000000SAMN02369451
DSM 16991
GCA_001435585.1ContigAZEC00000000SAMN02369469
DSM 12744
GCA_001435975.1ScaffoldAYYR00000000SAMN02369441
DSM 20515
GCA_001433995.1ContigAZCX00000000SAMN02369456
JCM 15530
GCA_001436395.1ContigAZGJ00000000SAMN02369504
DSM 5705
GCA_001434895.1ScaffoldAZEE00000000SAMN02369464
DSM 19909
GCA_001435115.1ScaffoldAZFD00000000SAMN02369376
DSM 15502
GCA_001436595.1ScaffoldAYZM00000000SAMN02369474
DSM 23365
GCA_001436895.1ScaffoldJQAY00000000SAMN02797800
DSM 20196
GCA_001436865.1ScaffoldJQAX00000000SAMN02797799
DSM 20190
GCA_001438705.1ScaffoldJQBP00000000SAMN02797804
DSM 20593
GCA_001437425.1ScaffoldJQCD00000000SAMN02797798
DSM 20014
GCA_001437355.1ScaffoldJQBM00000000SAMN02797781
DSM 20410
SRA Data Details
ParameterValue
Data volume, Gbases121
Data volume, Mbytes80959

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center