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Accession: PRJNA481356 ID: 481356

Bacteria

Vet-LIRN-Other-LA

: Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria
AccessionPRJNA481356
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 28-Jan-2022
Vet-LIRN-CVM-FDA
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)122
SRA Experiments132
Other datasets
BioSample128
Assembly122
Assembly details:
Assembly levelNumber of Assemblies
122
122
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_022388555.1ContigABFFCL000000000SAMN26225115
OTH-21-VL-LA-ND-0022
GCA_036682505.1ContigABQHGF000000000SAMN39962847
OTH-23-VL-LA-ND-0048
GCA_036682365.1ContigABQHGE000000000SAMN39962846
OTH-23-VL-LA-ND-0030
GCA_036682005.1ContigABQHFG000000000SAMN39962844
OTH-23-VL-LA-ND-0028
GCA_036681965.1ContigABQHFH000000000SAMN39962845
OTH-23-VL-LA-ND-0029
GCA_036681945.1ContigABQHFF000000000SAMN39962843
OTH-23-VL-LA-ND-0024
GCA_036681925.1ContigABQHFE000000000SAMN39962842
OTH-23-VL-LA-ND-0023
GCA_036681885.1ContigABQHFD000000000SAMN39962841
OTH-23-VL-LA-ND-0014
GCA_033643365.1ContigABOVFJ000000000SAMN35060441
OTH-22-VL-LA-ND-0033
GCA_033515975.1ContigABOSQM000000000SAMN35092193
OTH-23-VL-LA-ND-0011
GCA_033515935.1ContigABOSQF000000000SAMN35092192
OTH-23-VL-LA-ND-0005
GCA_029678345.1ContigABLLUR000000000SAMN31751754
OTH-22-VL-LA-TX-0020
GCA_025650895.1ContigABISYN000000000SAMN31230274
OTH-22-VL-LA-KY-0016
GCA_031941125.1ContigABMXPD000000000SAMN36808729
OTH-23-VL-LA-TX-0006
GCA_033552855.1ContigABOSWG000000000SAMN38183122
OTH-23-VL-LA-KY-0014
GCA_029681945.1ContigABLLYA000000000SAMN32907802
OTH-22-VL-LA-PA-RYAN-0043
GCA_026216375.1ContigABJKNA000000000SAMN31751752
OTH-22-VL-LA-TX-0012
GCA_028172745.1ContigABKIZV000000000SAMN32907794
OTH-22-VL-LA-KS-0050
GCA_036582045.1ContigABQGCC000000000SAMN39923252
OTH-23-VL-LA-TX-0039
GCA_033552815.1ContigABOSWF000000000SAMN38183121
OTH-23-VL-LA-TX-0026
GCA_033516155.1ContigABOSQU000000000SAMN35154720
OTH-22-VL-LA-TX-0045
GCA_033516195.1ContigABOSQX000000000SAMN35154721
OTH-22-VL-LA-TX-0048
GCA_033516115.1ContigABOSQT000000000SAMN35154719
OTH-22-VL-LA-TX-0042
GCA_033516095.1ContigABOSQS000000000SAMN35154718
OTH-22-VL-LA-TX-0040
GCA_033516075.1ContigABOSQR000000000SAMN35154728
OTH-22-VL-LA-PA-RYAN-0065
GCA_028172685.1ContigABKIZS000000000SAMN32907791
OTH-22-VL-LA-KS-0043
GCA_028172705.1ContigABKIZT000000000SAMN32907804
OTH-22-VL-LA-PA-RYAN-0049
GCA_028173145.1ContigABKJAQ000000000SAMN32907800
OTH-22-VL-LA-TX-0035
GCA_028173125.1ContigABKJAN000000000SAMN32907806
OTH-22-VL-LA-KY-0031
GCA_028173105.1ContigABKJAO000000000SAMN32907797
OTH-22-VL-LA-TX-0032
GCA_028173085.1ContigABKJAL000000000SAMN32907801
OTH-22-VL-LA-PA-RYAN-0042
GCA_028173065.1ContigABKJAM000000000SAMN32907805
OTH-22-VL-LA-PA-RYAN-0054
GCA_028172785.1ContigABKIZW000000000SAMN32907795
OTH-22-VL-LA-TX-0024
GCA_028172765.1ContigABKIZX000000000SAMN32907799
OTH-22-VL-LA-TX-0034
GCA_028172725.1ContigABKIZU000000000SAMN32907793
OTH-22-VL-LA-KS-0047
GCA_028173405.1ContigABKJBA000000000SAMN32907798
OTH-22-VL-LA-TX-0033
GCA_028173385.1ContigABKJAX000000000SAMN32907796
OTH-22-VL-LA-TX-0028
GCA_028173365.1ContigABKJAY000000000SAMN32907808
OTH-22-VL-LA-KY-0038
GCA_028182705.1ContigABKJFG000000000SAMN32907803
OTH-22-VL-LA-PA-RYAN-0044
GCA_028182685.1ContigABKJFF000000000SAMN32907792
OTH-22-VL-LA-KS-0046
GCA_029678325.1ContigABLLUP000000000SAMN31751756
OTH-22-VL-LA-PA-RYAN-0036
GCA_029675885.1ContigABLLSG000000000SAMN22366651
OTH-21-VL-LA-PA-Ryan-0039
GCA_029675605.1ContigABLLRR000000000SAMN26225114
OTH-21-VL-LA-TX-0025
GCA_029675545.1ContigABLLRO000000000SAMN29661713
OTH-22-VL-LA-PA-RYAN-0015
GCA_029675505.1ContigABLLRD000000000SAMN31751749
OTH-22-VL-LA-KS-0029
GCA_029675425.1ContigABLLRM000000000SAMN29661716
OTH-22-VL-LA-KS-0006
GCA_029675405.1ContigABLLRP000000000SAMN29661715
OTH-22-VL-LA-KS-0005
GCA_029675385.1ContigABLLRN000000000SAMN29661712
OTH-22-VL-LA-PA-RYAN-0014
GCA_029675365.1ContigABLLRL000000000SAMN29661711
OTH-22-VL-LA-PA-RYAN-0013
GCA_029675345.1ContigABLLRK000000000SAMN29661709
OTH-22-VL-LA-PA-RYAN-0007
GCA_029675325.1ContigABLLRJ000000000SAMN29661717
OTH-22-VL-LA-KS-0009
GCA_029675305.1ContigABLLRF000000000SAMN31230273
OTH-22-VL-LA-KY-0015
GCA_029675285.1ContigABLLRH000000000SAMN29661708
OTH-22-VL-LA-PA-RYAN-0006
GCA_029675265.1ContigABLLRE000000000SAMN31751750
OTH-22-VL-LA-KS-0032
GCA_029675245.1ContigABLLRG000000000SAMN31751751
OTH-22-VL-LA-KS-0034
GCA_029675225.1ContigABLLRC000000000SAMN31751748
OTH-22-VL-LA-KS-0026
GCA_029675205.1ContigABLLRA000000000SAMN31751758
OTH-22-VL-LA-KY-0022
GCA_029675185.1ContigABLLQZ000000000SAMN31751746
OTH-22-VL-LA-KS-0020
GCA_029675165.1ContigABLLQX000000000SAMN31751757
OTH-22-VL-LA-KY-0021
GCA_029675085.1ContigABLLQS000000000SAMN29661714
OTH-22-VL-LA-PA-RYAN-0016
GCA_029675065.1ContigABLLQT000000000SAMN31751753
OTH-22-VL-LA-TX-0015
GCA_030915645.1ContigABLRQZ000000000SAMN35092191
OTH-23-VL-LA-PA-RYAN-0006
GCA_031377315.1ContigABMFFE000000000SAMN36808727
OTH-23-VL-LA-TX-0003
GCA_031377195.1ContigABMFFD000000000SAMN36808725
OTH-23-VL-LA-KS-0010
GCA_031377165.1ContigABMFFA000000000SAMN36808723
OTH-23-VL-LA-KS-0003
GCA_031377445.1ContigABMFFI000000000SAMN36808732
OTH-23-VL-LA-KY-0013
GCA_031377395.1ContigABMFFH000000000SAMN36808731
OTH-23-VL-LA-TX-0012
GCA_031377415.1ContigABMFFG000000000SAMN36808730
OTH-23-VL-LA-TX-0007
GCA_031377345.1ContigABMFFC000000000SAMN36808726
OTH-23-VL-LA-KS-0015
GCA_031377365.1ContigABMFFF000000000SAMN36808728
OTH-23-VL-LA-TX-0004
GCA_031377225.1ContigABMFFB000000000SAMN36808724
OTH-23-VL-LA-KS-0005
GCA_031471015.1ContigABMHQN000000000SAMN35816569
OTH-23-VL-LA-PA-RYAN-0007
GCA_031470995.1ContigABMHQM000000000SAMN35816571
OTH-23-VL-LA-PA-RYAN-0017
GCA_031470445.1ContigABMHQK000000000SAMN35816568
OTH-23-VL-LA-PA-RYAN-0005
GCA_031472445.1ContigABMHSC000000000SAMN35154727
OTH-22-VL-LA-PA-RYAN-0060
GCA_031472425.1ContigABMHSF000000000SAMN35154722
OTH-22-VL-LA-TX-0050
GCA_031472405.1ContigABMHSE000000000SAMN35154717
OTH-22-VL-LA-TX-0037
GCA_031472365.1ContigABMHSA000000000SAMN35154713
OTH-22-VL-LA-ND-0034
GCA_031472385.1ContigABMHSD000000000SAMN35154715
OTH-22-VL-LA-KS-0060
GCA_031472345.1ContigABMHSB000000000SAMN35154714
OTH-22-VL-LA-KS-0055
GCA_033552795.1ContigABOSWD000000000SAMN38183119
OTH-23-VL-LA-TX-0021
GCA_033552775.1ContigABOSWB000000000SAMN38183118
OTH-23-VL-LA-TX-0019
GCA_033552755.1ContigABOSWA000000000SAMN38183117
OTH-23-VL-LA-TX-0016
GCA_033552835.1ContigABOSWE000000000SAMN38183120
OTH-23-VL-LA-TX-0024
GCA_033552905.1ContigABOSWI000000000SAMN38183124
OTH-23-VL-LA-KY-0030
GCA_033552875.1ContigABOSWH000000000SAMN38183123
OTH-23-VL-LA-KY-0022
GCA_032878055.1ContigABODWI000000000SAMN37882145
OTH-23-VL-LA-KS-0026
GCA_032878035.1ContigABODWH000000000SAMN37882144
OTH-23-VL-LA-KS-0024
GCA_038095035.1ContigABRRRX000000000SAMN40933092
OTH-23-VL-LA-KS-0063
GCA_038095515.1ContigABRRSV000000000SAMN40933090
OTH-23-VL-LA-KS-0057
GCA_038095345.1ContigABRRSN000000000SAMN40933093
OTH-23-VL-LA-KS-0064
GCA_038095315.1ContigABRRSL000000000SAMN40933091
OTH-23-VL-LA-KS-0059
GCA_036581985.1ContigABQGBW000000000SAMN39923248
OTH-23-VL-LA-TX-0032
GCA_036582025.1ContigABQGBZ000000000SAMN39923249
OTH-23-VL-LA-TX-0033
GCA_036582005.1ContigABQGCA000000000SAMN39923250
OTH-23-VL-LA-TX-0035
GCA_036581965.1ContigABQGBX000000000SAMN39923259
OTH-23-VL-LA-KY-0036
GCA_036581945.1ContigABQGBV000000000SAMN39923257
OTH-23-VL-LA-PA-RYAN-0034
GCA_036581925.1ContigABQGBU000000000SAMN39923258
OTH-23-VL-LA-KY-0024
GCA_036581885.1ContigABQGBT000000000SAMN39923256
OTH-23-VL-LA-KS-0036
GCA_036581845.1ContigABQGBS000000000SAMN39923247
OTH-23-VL-LA-TX-0031
GCA_036582165.1ContigABQGCG000000000SAMN39923254
OTH-23-VL-LA-KS-0034
GCA_036582105.1ContigABQGCE000000000SAMN39923255
OTH-23-VL-LA-KS-0035
GCA_036582075.1ContigABQGCB000000000SAMN39923251
OTH-23-VL-LA-TX-0036
GCA_036582065.1ContigABQGCD000000000SAMN39923253
OTH-23-VL-LA-TX-0043
GCA_036581825.1ContigABQGBR000000000SAMN39923246
OTH-23-VL-LA-TX-0029
GCA_033516055.1ContigABOSQQ000000000SAMN35154725
OTH-22-VL-LA-PA-RYAN-0037
GCA_029681985.1ContigABLLYC000000000SAMN32907809
OTH-22-VL-LA-KY-0043
GCA_029681965.1ContigABLLYB000000000SAMN32907807
OTH-22-VL-LA-KY-0033
GCA_029678385.1ContigABLLUT000000000SAMN29661707
OTH-22-VL-LA-PA-RYAN-0005
GCA_029678365.1ContigABLLUS000000000SAMN29661719
OTH-22-VL-LA-KY-0005
GCA_036581905.1ContigABQGBY000000000SAMN39923260
OTH-23-VL-LA-KY-0037
GCA_033516035.1ContigABOSQP000000000SAMN35154724
OTH-22-VL-LA-TX-0052
GCA_032773975.1ContigABNYIY000000000SAMN35816570
OTH-23-VL-LA-PA-RYAN-0016
GCA_029678285.1ContigABLLUQ000000000SAMN31751747
OTH-22-VL-LA-KS-0025
GCA_033657025.1ContigABOVTD000000000SAMN29661718
OTH-22-VL-LA-TX-0010
GCA_029680665.1ContigABLLWO000000000SAMN31751755
OTH-22-VL-LA-PA-RYAN-0035
GCA_030868935.1ContigABLQKD000000000SAMN35154726
OTH-22-VL-LA-PA-RYAN-0059
GCA_038095475.1ContigABRRSO000000000SAMN40933095
OTH-23-VL-LA-KS-0042
GCA_029173145.1ContigABKZFM000000000SAMN33714451
OTH-22-VL-LA-TX-0041
GCA_029173125.1ContigABKZFN000000000SAMN33714452
OTH-22-VL-LA-TX-0049
GCA_038099735.1ContigABRRUY000000000SAMN40933094
OTH-23-VL-LA-TX-0018
GCA_021661955.1ContigABEVIC000000000SAMN18988757
OTH-21-VL-LA-KS-8030412
SRA Data Details
ParameterValue
Data volume, Gbases59
Data volume, Mbytes36592

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