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Accession: PRJEB32907 ID: 572857

Environmental Pseudomonas aeruginosa Jakarta

Environmental samples from a genomic characterization of Carbapenem-non-susceptible Pseudomonas aeruginosa strains from two ICUs from the referral national hospital in Jakarta, Indonesia.

Carbapenem-non-susceptible P. aeruginosa (CNPA) strains were collected during two different periods from the two intensive care units (ICUs) present in the Dr. More...
AccessionPRJEB32907
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 20-Sep-2019
bioMerieux - La Balme-Les Grottes
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)26065
WGS master222
SRA Experiments15
Other datasets
BioSample237
Assembly222
Assembly details:
Assembly levelNumber of Assemblies
15
207
222
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_902204155.1ContigCABITN000000000SAMEA5693878
357
GCA_902204165.1ContigCABITP000000000SAMEA5693877
352
GCA_902204135.1ScaffoldCABITM000000000SAMEA5693874
327
GCA_902204125.1ScaffoldCABITL000000000SAMEA5693875
327
GCA_902204115.1ContigCABITK000000000SAMEA5693876
352
GCA_902204095.1ContigCABITI000000000SAMEA5693873
324
GCA_902204105.1ContigCABITJ000000000SAMEA5693872
324
GCA_902204085.1ContigCABITC000000000SAMEA5693870
324
GCA_902204075.1ContigCABITH000000000SAMEA5693871
324
GCA_902204065.1ContigCABITG000000000SAMEA5693866
324
GCA_902204045.1ContigCABITD000000000SAMEA5693864
324
GCA_902204055.1ContigCABITB000000000SAMEA5693867
324
GCA_902204035.1ContigCABITF000000000SAMEA5693863
318
GCA_902204025.1ContigCABITE000000000SAMEA5693869
324
GCA_902204015.1ContigCABISZ000000000SAMEA5693868
324
GCA_902204005.1ContigCABITA000000000SAMEA5693865
324
GCA_902203995.1ContigCABISX000000000SAMEA5693862
307
GCA_902203985.1ContigCABISY000000000SAMEA5693861
305
GCA_902203975.1ContigCABISW000000000SAMEA5693860
304
GCA_902203965.1ContigCABISV000000000SAMEA5693859
304
GCA_902203955.1ScaffoldCABISU000000000SAMEA5693857
304
GCA_902203945.1ScaffoldCABIST000000000SAMEA5693858
304
GCA_902203935.1ContigCABISQ000000000SAMEA5693855
304
GCA_902203925.1ContigCABISR000000000SAMEA5693856
304
GCA_902203915.1ContigCABISS000000000SAMEA5693854
286
GCA_902203905.1ContigCABISP000000000SAMEA5693852
273
GCA_902203895.1ContigCABISO000000000SAMEA5693853
283
GCA_902203885.1ScaffoldCABISN000000000SAMEA5693849
273
GCA_902203875.1ContigCABISM000000000SAMEA5693846
240
GCA_902203865.1ScaffoldCABISJ000000000SAMEA5693850
273
GCA_902203855.1ScaffoldCABISL000000000SAMEA5693848
254
GCA_902203845.1ContigCABISK000000000SAMEA5693847
240
GCA_902203835.1ContigCABISI000000000SAMEA5693851
273
GCA_902203825.1ContigCABISH000000000SAMEA5693842
228
GCA_902203815.1ScaffoldCABISG000000000SAMEA5693843
236
GCA_902203805.1ContigCABISF000000000SAMEA5693845
237
GCA_902203795.1ScaffoldCABISE000000000SAMEA5693844
236
GCA_902203785.1ContigCABISD000000000SAMEA5693841
228
GCA_902203775.1ContigCABISC000000000SAMEA5693840
228
GCA_902203765.1ContigCABISB000000000SAMEA5693839
222
GCA_902203745.1ContigCABIRZ000000000SAMEA5693838
222
GCA_902203755.1ContigCABISA000000000SAMEA5693834
211
GCA_902203735.1ContigCABIRY000000000SAMEA5693836
220
GCA_902203725.1ContigCABIRX000000000SAMEA5693835
214
GCA_902203715.1ContigCABIRW000000000SAMEA5693837
220
GCA_902203705.1ContigCABIRV000000000SAMEA5693832
206
GCA_902203695.1ContigCABIRU000000000SAMEA5693828
203
GCA_902203685.1ContigCABIRS000000000SAMEA5693829
203
GCA_902203675.1ContigCABIRT000000000SAMEA5693833
211
GCA_902203665.1ContigCABIRQ000000000SAMEA5693830
203
GCA_902203655.1ContigCABIRR000000000SAMEA5693826
198
GCA_902203645.1ContigCABIRO000000000SAMEA5693827
203
GCA_902203635.1ContigCABIRP000000000SAMEA5693831
203
GCA_902203625.1ContigCABIRN000000000SAMEA5693825
198
GCA_902203615.1ContigCABIRL000000000SAMEA5693823
194
GCA_902203605.1ContigCABIRM000000000SAMEA5693824
196
GCA_902203595.1ContigCABIRK000000000SAMEA5693821
184
GCA_902203585.1ContigCABIRJ000000000SAMEA5693822
194
GCA_902203475.1ContigCABIRI000000000SAMEA5693815
129
GCA_902203455.1ContigCABIRH000000000SAMEA5693820
161
GCA_902203435.1ContigCABIRF000000000SAMEA5693817
129
GCA_902203415.1ContigCABIRG000000000SAMEA5693818
132
GCA_902203425.1ContigCABIRE000000000SAMEA5693814
128
GCA_902203405.1ContigCABIRD000000000SAMEA5693816
129
GCA_902203395.1ContigCABIRC000000000SAMEA5693819
132
GCA_902203385.1ContigCABIRA000000000SAMEA5693808
93
GCA_902203375.1ContigCABIRB000000000SAMEA5693813
128
GCA_902203365.1ContigCABIQY000000000SAMEA5693812
108
GCA_902203355.1ContigCABIQZ000000000SAMEA5693810
104
GCA_902203345.1ContigCABIQX000000000SAMEA5693811
105
GCA_902203335.1ContigCABIQW000000000SAMEA5693809
94
GCA_902203325.1ContigCABIQV000000000SAMEA5693807
85
GCA_902203315.1ContigCABIQT000000000SAMEA5693804
82
GCA_902203305.1ContigCABIQS000000000SAMEA5693805
85
GCA_902203285.1ContigCABIQU000000000SAMEA5693803
82
GCA_902203295.1ContigCABIQR000000000SAMEA5693806
85
GCA_902203265.1ContigCABIQQ000000000SAMEA5693801
72
GCA_902203275.1ContigCABIQP000000000SAMEA5693800
68
GCA_902203255.1ContigCABIQO000000000SAMEA5693802
80
GCA_902203245.1ContigCABIQN000000000SAMEA5693799
68
GCA_902203235.1ContigCABIQM000000000SAMEA5693790
51
GCA_902203225.1ContigCABIQL000000000SAMEA5693798
68
GCA_902203195.1ContigCABIQK000000000SAMEA5693795
66
GCA_902203215.1ContigCABIQI000000000SAMEA5693797
66
GCA_902203185.1ContigCABIQG000000000SAMEA5693796
66
GCA_902203205.1ContigCABIQE000000000SAMEA5693791
52
GCA_902203175.1ContigCABIQJ000000000SAMEA5693789
51
GCA_902203165.1ContigCABIQF000000000SAMEA5693792
52
GCA_902203155.1ContigCABIQH000000000SAMEA5693793
58
GCA_902203145.1ContigCABIQD000000000SAMEA5693794
62
GCA_902203135.1ContigCABIQB000000000SAMEA5693787
51
GCA_902203125.1ContigCABIQC000000000SAMEA5693788
51
GCA_902203115.1ContigCABIPX000000000SAMEA5693785
51
GCA_902203095.1ScaffoldCABIPZ000000000SAMEA5693786
51
GCA_902203105.1ContigCABIPY000000000SAMEA5693784
51
GCA_902203085.1ContigCABIQA000000000SAMEA5693783
51
GCA_902203075.1ContigCABIPN000000000SAMEA5693769
25
GCA_902203015.1ScaffoldCABIPW000000000SAMEA5693771
37
GCA_902203005.1ContigCABIPT000000000SAMEA5693776
40
GCA_902202995.1ContigCABIPV000000000SAMEA5693779
49
GCA_902202975.1ScaffoldCABIPQ000000000SAMEA5693777
49
GCA_902202955.1ContigCABIPU000000000SAMEA5693775
38
GCA_902203035.1ContigCABIPL000000000SAMEA5693778
49
GCA_902202985.1ContigCABIPS000000000SAMEA5693773
38
GCA_902202965.1ContigCABIPO000000000SAMEA5693770
29
GCA_902202905.1ContigCABIPF000000000SAMEA5693768
25
GCA_902202935.1ContigCABIPG000000000SAMEA5693767
25
GCA_902202915.1ContigCABIPI000000000SAMEA5693766
17
GCA_902202925.1ContigCABIPH000000000SAMEA5693765
17
GCA_902202895.1ContigCABIPD000000000SAMEA5693764
5
GCA_902202815.1ContigCABIPA000000000SAMEA5693762
421
GCA_902202845.1ContigCABIOY000000000SAMEA5693759
412
GCA_902202865.1ContigCABIOV000000000SAMEA5693761
420
GCA_902202735.1ContigCABIOO000000000SAMEA5693763
440
GCA_902202715.1ContigCABIOM000000000SAMEA5693760
419
GCA_902202725.1ContigCABION000000000SAMEA5693758
412
GCA_902202705.1ContigCABIOL000000000SAMEA5693757
410
GCA_902202695.1ContigCABIOK000000000SAMEA5693756
398
GCA_902202685.1ContigCABIOJ000000000SAMEA5693748
389
GCA_902202655.1ContigCABINZ000000000SAMEA5693747
385
GCA_902202645.1ContigCABIOI000000000SAMEA5693744
370
GCA_902202665.1ContigCABIOC000000000SAMEA5693741
364
GCA_902202675.1ContigCABIOF000000000SAMEA5693754
395
GCA_902202585.1ContigCABINY000000000SAMEA5693745
370
GCA_902202625.1ContigCABIOG000000000SAMEA5693732
349
GCA_902202605.1ContigCABIOE000000000SAMEA5693753
395
GCA_902202595.1ContigCABIOD000000000SAMEA5693742
370
GCA_902202615.1ContigCABIOB000000000SAMEA5693755
395
GCA_902202635.1ContigCABIOH000000000SAMEA5693750
395
GCA_902202575.1ContigCABIOA000000000SAMEA5693746
370
GCA_902202565.1ContigCABINU000000000SAMEA5693728
342
GCA_902202555.1ContigCABINW000000000SAMEA5693749
393
GCA_902202545.1ContigCABINV000000000SAMEA5693752
395
GCA_902202535.1ContigCABINX000000000SAMEA5693751
395
GCA_902202525.1ContigCABINT000000000SAMEA5693743
370
GCA_902202505.1ContigCABINS000000000SAMEA5693727
338
GCA_902202515.1ContigCABINR000000000SAMEA5693731
349
GCA_902202495.1ContigCABINQ000000000SAMEA5693730
349
GCA_902202485.1ContigCABINP000000000SAMEA5693740
362
GCA_902202465.1ContigCABINO000000000SAMEA5693720
275
GCA_902202475.1ContigCABING000000000SAMEA5693733
351
GCA_902202445.1ContigCABINE000000000SAMEA5693723
312
GCA_902202435.1ContigCABINA000000000SAMEA5693724
317
GCA_902202425.1ContigCABINL000000000SAMEA5693736
351
GCA_902202455.1ContigCABIND000000000SAMEA5693729
349
GCA_902202385.1ContigCABINI000000000SAMEA5693722
294
GCA_902202325.1ContigCABINB000000000SAMEA5693738
362
GCA_902202355.1ContigCABINN000000000SAMEA5693735
351
GCA_902202335.1ContigCABINH000000000SAMEA5693739
362
GCA_902202405.1ContigCABINC000000000SAMEA5693734
351
GCA_902202345.1ContigCABINM000000000SAMEA5693719
265
GCA_902202365.1ContigCABINF000000000SAMEA5693721
275
GCA_902202415.1ContigCABINJ000000000SAMEA5693726
335
GCA_902202395.1ContigCABINK000000000SAMEA5693725
318
GCA_902202375.1ContigCABIMZ000000000SAMEA5693737
362
GCA_902202305.1ContigCABIMY000000000SAMEA5693718
258
GCA_902202315.1ContigCABIMX000000000SAMEA5693717
256
GCA_902202275.1ContigCABIMW000000000SAMEA5693714
256
GCA_902202295.1ContigCABIMU000000000SAMEA5693713
256
GCA_902202285.1ContigCABIMV000000000SAMEA5693715
256
GCA_902202265.1ContigCABIMR000000000SAMEA5693709
237
GCA_902202245.1ContigCABIMD000000000SAMEA5693702
176
GCA_902202235.1ScaffoldCABIMQ000000000SAMEA5693706
233
GCA_902202255.1ContigCABIMG000000000SAMEA5693701
175
GCA_902202205.1ContigCABIMH000000000SAMEA5693704
201
GCA_902202165.1ContigCABIMO000000000SAMEA5693710
237
GCA_902202125.1ContigCABIMN000000000SAMEA5693698
166
GCA_902202145.1ContigCABIMT000000000SAMEA5693712
256
GCA_902202155.1ContigCABIME000000000SAMEA5693716
256
GCA_902202185.1ContigCABIMP000000000SAMEA5693699
166
GCA_902202215.1ContigCABIMJ000000000SAMEA5693711
247
GCA_902202195.1ContigCABIMS000000000SAMEA5693707
233
GCA_902202225.1ContigCABIMF000000000SAMEA5693705
205
GCA_902202135.1ContigCABIMK000000000SAMEA5693703
179
GCA_902202175.1ContigCABIMM000000000SAMEA5693696
162
GCA_902202115.1ContigCABIMI000000000SAMEA5693700
166
GCA_902202105.1ContigCABIML000000000SAMEA5693708
237
GCA_902202095.1ContigCABILW000000000SAMEA5693680
98
GCA_902202075.1ContigCABILQ000000000SAMEA5693684
98
GCA_902202005.1ContigCABILX000000000SAMEA5693685
98
GCA_902202085.1ContigCABILV000000000SAMEA5693691
101
GCA_902202025.1ContigCABILO000000000SAMEA5693695
141
GCA_902202045.1ContigCABILT000000000SAMEA5693694
141
GCA_902202055.1ContigCABIMC000000000SAMEA5693693
141
GCA_902202015.1ContigCABILP000000000SAMEA5693688
98
GCA_902202065.1ContigCABILY000000000SAMEA5693692
128
GCA_902201985.1ContigCABILU000000000SAMEA5693687
98
GCA_902201995.1ContigCABILN000000000SAMEA5693683
98
GCA_902202035.1ContigCABILR000000000SAMEA5693690
101
GCA_902201945.1ContigCABIMA000000000SAMEA5693689
98
GCA_902201975.1ContigCABIMB000000000SAMEA5693679
98
GCA_902201965.1ContigCABILS000000000SAMEA5693697
162
GCA_902201935.1ContigCABILM000000000SAMEA5693682
98
GCA_902201955.1ContigCABILZ000000000SAMEA5693681
98
GCA_902201925.1ContigCABILL000000000SAMEA5693678
95
GCA_902201915.1ContigCABILK000000000SAMEA5693676
93
GCA_902201905.1ContigCABILJ000000000SAMEA5693686
98
GCA_902201825.1ContigCABIKS000000000SAMEA5693669
46
GCA_902201845.1ContigCABIKY000000000SAMEA5693673
83
GCA_902201785.1ContigCABIKZ000000000SAMEA5693657
6
GCA_902201805.1ContigCABILD000000000SAMEA5693667
46
GCA_902201865.1ContigCABIKT000000000SAMEA5693671
71
GCA_902201765.1ContigCABIKX000000000SAMEA5693663
46
GCA_902201775.1ContigCABIKQ000000000SAMEA5693661
46
GCA_902201815.1ContigCABILH000000000SAMEA5693674
87
GCA_902201835.1ContigCABIKU000000000SAMEA5693659
34
GCA_902201755.1ScaffoldCABIKW000000000SAMEA5693658
19
GCA_902201885.1ContigCABILA000000000SAMEA5693656
6
GCA_902201895.1ContigCABILE000000000SAMEA5693670
46
GCA_902201875.1ContigCABILB000000000SAMEA5693662
46
GCA_902201855.1ContigCABIKV000000000SAMEA5693664
46
GCA_902201795.1ContigCABILG000000000SAMEA5693660
46
GCA_902201745.1ContigCABIKP000000000SAMEA5693665
46
GCA_902201735.1ContigCABIKR000000000SAMEA5693677
93
GCA_902201725.1ContigCABILF000000000SAMEA5693675
93
GCA_902201715.1ContigCABILC000000000SAMEA5693666
46
GCA_902201705.1ContigCABILI000000000SAMEA5693672
83
GCA_902203065.1ContigCABIPK000000000SAMEA5693774
38
GCA_902203055.1ContigCABIPM000000000SAMEA5693782
51
GCA_902203045.1ContigCABIPR000000000SAMEA5693780
51
GCA_902202945.1ScaffoldCABIPJ000000000SAMEA5693772
37
GCA_902203025.1ContigCABIPP000000000SAMEA5693781
51
SRA Data Details
ParameterValue
Data volume, Gbases30
Data volume, Mbytes14001

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