ID 877552 - BioProject

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Accession: PRJEB55795 ID: 877552

EMG produced TPA metagenomics assembly of PRJNA646227 data set (Samples from fecal pellets of two strains of mouse (HLB444 and Black 6); DNA extractions and mWGS sequences.).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA646227, and was assembled with metaSPAdes v3. More...

Accession	PRJEB55795
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 7-Sep-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1320
WGS master	78
Publications
PubMed	1
PMC	1
Other datasets
BioSample	78
Assembly	78

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

78
78

Assembly	WGS	BioSample	Taxonomy
GCA_947038805.1	CAMQWR000000000	SAMEA111413014	Akkermansia muciniphila
GCA_947040795.1	CAMRCM000000000	SAMEA111413050	Angelakisella massiliensis
GCA_947036685.1	CAMQSG000000000	SAMEA111413002	Bifidobacterium pseudolongum
GCA_947041425.1	CAMRDH000000000	SAMEA111413053	Dubosiella newyorkensis
GCA_947041375.1	CAMRDY000000000	SAMEA111413045	Eubacterium plexicaudatum
GCA_947038885.1	CAMQXL000000000	SAMEA111413027	Lactobacillus johnsonii
GCA_947036605.1	CAMQSA000000000	SAMEA111413005	Muribaculum intestinale
GCA_947038935.1	CAMQXN000000000	SAMEA111413028	uncultured Anaerotruncus sp.
GCA_947041405.1	CAMRDI000000000	SAMEA111413007	uncultured Bacteroidales bacterium
GCA_947036985.1	CAMQSO000000000	SAMEA111413003	uncultured Clostridia bacterium
GCA_947038865.1	CAMQXQ000000000	SAMEA111413034	uncultured Clostridia bacterium
GCA_947038905.1	CAMQXP000000000	SAMEA111413024	uncultured Clostridia bacterium
GCA_947041385.1	CAMREB000000000	SAMEA111413048	uncultured Clostridia bacterium
GCA_947036905.1	CAMQSZ000000000	SAMEA111413016	uncultured Clostridia bacterium
GCA_947038855.1	CAMQXO000000000	SAMEA111413017	uncultured Clostridia bacterium
GCA_947041365.1	CAMRDN000000000	SAMEA111413037	uncultured Clostridia bacterium
GCA_947036555.1	CAMQRX000000000	SAMEA111413040	uncultured Clostridia bacterium
GCA_947040885.1	CAMRCR000000000	SAMEA111413062	uncultured Clostridia bacterium
GCA_947036795.1	CAMQSB000000000	SAMEA111413032	uncultured Clostridia bacterium
GCA_947040625.1	CAMRCJ000000000	SAMEA111413041	uncultured Clostridia bacterium
GCA_947041335.1	CAMRDU000000000	SAMEA111413043	uncultured Clostridia bacterium
GCA_947040925.1	CAMRCS000000000	SAMEA111413065	uncultured Clostridia bacterium
GCA_947040685.1	CAMRCH000000000	SAMEA111413058	uncultured Clostridia bacterium
GCA_947036475.1	CAMQRG000000000	SAMEA111413020	uncultured Clostridia bacterium
GCA_947040655.1	CAMRCD000000000	SAMEA111413049	uncultured Clostridia bacterium
GCA_947040765.1	CAMRCK000000000	SAMEA111413054	uncultured Coriobacteriaceae bacterium
GCA_947036805.1	CAMQSM000000000	SAMEA111413033	uncultured Dorea sp.
GCA_947041395.1	CAMRDR000000000	SAMEA111412996	uncultured Erysipelotrichaceae bacterium
GCA_947041325.1	CAMRDO000000000	SAMEA111413044	uncultured Firmicutes bacterium
GCA_947038925.1	CAMQXS000000000	SAMEA111413031	uncultured Firmicutes bacterium
GCA_947040715.1	CAMRCA000000000	SAMEA111413052	uncultured Firmicutes bacterium
GCA_947036455.1	CAMQRH000000000	SAMEA111413011	uncultured Flavonifractor sp.
GCA_947036665.1	CAMQSP000000000	SAMEA111413038	uncultured Hungatella sp.
GCA_947040725.1	CAMRCF000000000	SAMEA111413059	uncultured Hungatella sp.
GCA_947036565.1	CAMQRZ000000000	SAMEA111412993	uncultured Lachnospiraceae bacterium
GCA_947041415.1	CAMRDV000000000	SAMEA111413036	uncultured Lachnospiraceae bacterium
GCA_947036535.1	CAMQSJ000000000	SAMEA111413000	uncultured Lachnospiraceae bacterium
GCA_947038785.1	CAMQXG000000000	SAMEA111412999	uncultured Lachnospiraceae bacterium
GCA_947040935.1	CAMRCU000000000	SAMEA111413063	uncultured Lachnospiraceae bacterium
GCA_947036495.1	CAMQRK000000000	SAMEA111413008	uncultured Lachnospiraceae bacterium
GCA_947041565.1	CAMREE000000000	SAMEA111413061	uncultured Lachnospiraceae bacterium
GCA_947036845.1	CAMQSQ000000000	SAMEA111412998	uncultured Lachnospiraceae bacterium
GCA_947041295.1	CAMRDJ000000000	SAMEA111413013	uncultured Lachnospiraceae bacterium
GCA_947040635.1	CAMRCG000000000	SAMEA111413046	uncultured Lachnospiraceae bacterium
GCA_947041535.1	CAMRDZ000000000	SAMEA111413064	uncultured Lachnospiraceae bacterium
GCA_947038775.1	CAMQXH000000000	SAMEA111413010	uncultured Lachnospiraceae bacterium
GCA_947038845.1	CAMQXR000000000	SAMEA111413012	uncultured Lachnospiraceae bacterium
GCA_947041445.1	CAMRDX000000000	SAMEA111413029	uncultured Lachnospiraceae bacterium
GCA_947038725.1	CAMQXI000000000	SAMEA111413009	uncultured Lachnospiraceae bacterium
GCA_947036825.1	CAMQSL000000000	SAMEA111413030	uncultured Lachnospiraceae bacterium
GCA_947036275.1	CAMQQR000000000	SAMEA111413025	uncultured Mollicutes bacterium
GCA_947041435.1	CAMRDF000000000	SAMEA111413039	uncultured Muribaculaceae bacterium
GCA_947040905.1	CAMRCQ000000000	SAMEA111413069	uncultured Muribaculaceae bacterium
GCA_947044285.1	CAMRGM000000000	SAMEA111412995	uncultured Muribaculaceae bacterium
GCA_947041555.1	CAMREA000000000	SAMEA111413068	uncultured Muribaculaceae bacterium
GCA_947040695.1	CAMRCC000000000	SAMEA111413047	uncultured Muribaculaceae bacterium
GCA_947038895.1	CAMQXJ000000000	SAMEA111413019	uncultured Muribaculaceae bacterium
GCA_947038825.1	CAMQWW000000000	SAMEA111412994	uncultured Muribaculaceae bacterium
GCA_947036415.1	CAMQQX000000000	SAMEA111413015	uncultured Oscillibacter sp.
GCA_947041575.1	CAMREC000000000	SAMEA111413056	uncultured Peptococcaceae bacterium
GCA_947040875.1	CAMRCP000000000	SAMEA111413067	uncultured Porphyromonadaceae bacterium
GCA_947041505.1	CAMRDP000000000	SAMEA111413070	uncultured Porphyromonadaceae bacterium
GCA_947041525.1	CAMRDS000000000	SAMEA111413060	uncultured Porphyromonadaceae bacterium
GCA_947038915.1	CAMQXM000000000	SAMEA111413022	uncultured Porphyromonadaceae bacterium
GCA_947036545.1	CAMQRR000000000	SAMEA111413035	uncultured Porphyromonadaceae bacterium
GCA_947040745.1	CAMRCB000000000	SAMEA111413042	uncultured Porphyromonadaceae bacterium
GCA_947038875.1	CAMQXK000000000	SAMEA111413023	uncultured Porphyromonadaceae bacterium
GCA_947038795.1	CAMQXD000000000	SAMEA111413004	uncultured Porphyromonadaceae bacterium
GCA_947041465.1	CAMRDL000000000	SAMEA111413057	uncultured Roseburia sp.
GCA_947041545.1	CAMRED000000000	SAMEA111413055	uncultured Roseburia sp.
GCA_947040785.1	CAMRCE000000000	SAMEA111413018	uncultured bacterium
GCA_947036325.1	CAMQQQ000000000	SAMEA111413021	uncultured bacterium
GCA_947036285.1	CAMQQV000000000	SAMEA111413026	uncultured bacterium
GCA_947040775.1	CAMRCN000000000	SAMEA111412997	uncultured bacterium
GCA_947041355.1	CAMRDQ000000000	SAMEA111413051	uncultured bacterium
GCA_947038765.1	CAMQXF000000000	SAMEA111413001	uncultured bacterium
GCA_947040865.1	CAMRCT000000000	SAMEA111413066	uncultured bacterium
GCA_947036395.1	CAMQQZ000000000	SAMEA111413006	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA646227 data set (Samples from fecal pellets of two strains of mouse (HLB444 and Black 6); DNA extractions and mWGS sequences.).

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