ID 891608 - BioProject

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Accession: PRJEB56770 ID: 891608

EMG produced TPA metagenomics assembly of PRJNA785116 data set (Metagenomic sequencing).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA785116, and was assembled with metaSPAdes v3. More...

Accession	PRJEB56770
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 18-Oct-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1193
WGS master	55
Publications
PubMed	1
PMC	1
Other datasets
BioSample	55
Assembly	55

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

55
55

Assembly	WGS	BioSample	Taxonomy
GCA_947245205.1	CAMXNI000000000	SAMEA111528713	Bacteroides acidifaciens
GCA_947244115.1	CAMXJM000000000	SAMEA111528743	Faecalibaculum rodentium
GCA_947243895.1	CAMXIC000000000	SAMEA111528753	Lactobacillus acidophilus
GCA_947244045.1	CAMXIS000000000	SAMEA111528748	Muribaculum intestinale
GCA_947244175.1	CAMXJA000000000	SAMEA111528738	uncultured Alistipes sp.
GCA_947244055.1	CAMXJF000000000	SAMEA111528746	uncultured Alistipes sp.
GCA_947244245.1	CAMXJQ000000000	SAMEA111528742	uncultured Bacteroidales bacterium
GCA_947244575.1	CAMXLJ000000000	SAMEA111528718	uncultured Bacteroidales bacterium
GCA_947244005.1	CAMXIH000000000	SAMEA111528755	uncultured Clostridia bacterium
GCA_947244085.1	CAMXJO000000000	SAMEA111528729	uncultured Clostridium sp.
GCA_947244075.1	CAMXIX000000000	SAMEA111528740	uncultured Desulfovibrio sp.
GCA_947244125.1	CAMXIZ000000000	SAMEA111528723	uncultured Helicobacter sp.
GCA_947243825.1	CAMXHZ000000000	SAMEA111528722	uncultured Lachnoclostridium sp.
GCA_947244185.1	CAMXJN000000000	SAMEA111528724	uncultured Lachnoclostridium sp.
GCA_947244255.1	CAMXJS000000000	SAMEA111528721	uncultured Lachnospiraceae bacterium
GCA_947244275.1	CAMXJV000000000	SAMEA111528728	uncultured Lachnospiraceae bacterium
GCA_947243885.1	CAMXJP000000000	SAMEA111528726	uncultured Lachnospiraceae bacterium
GCA_947244195.1	CAMXJJ000000000	SAMEA111528739	uncultured Lachnospiraceae bacterium
GCA_947243855.1	CAMXIK000000000	SAMEA111528763	uncultured Lachnospiraceae bacterium
GCA_947244015.1	CAMXII000000000	SAMEA111528758	uncultured Lachnospiraceae bacterium
GCA_947243985.1	CAMXIV000000000	SAMEA111528750	uncultured Lachnospiraceae bacterium
GCA_947243935.1	CAMXIO000000000	SAMEA111528761	uncultured Lachnospiraceae bacterium
GCA_947244065.1	CAMXJL000000000	SAMEA111528725	uncultured Mucispirillum sp.
GCA_947244435.1	CAMXLA000000000	SAMEA111528715	uncultured Muribaculaceae bacterium
GCA_947243975.1	CAMXIU000000000	SAMEA111528751	uncultured Muribaculaceae bacterium
GCA_947243995.1	CAMXIT000000000	SAMEA111528756	uncultured Muribaculaceae bacterium
GCA_947243915.1	CAMXIN000000000	SAMEA111528759	uncultured Muribaculaceae bacterium
GCA_947243875.1	CAMXIG000000000	SAMEA111528735	uncultured Muribaculaceae bacterium
GCA_947244035.1	CAMXIL000000000	SAMEA111528757	uncultured Muribaculaceae bacterium
GCA_947243945.1	CAMXIJ000000000	SAMEA111528760	uncultured Muribaculaceae bacterium
GCA_947244095.1	CAMXJI000000000	SAMEA111528732	uncultured Muribaculaceae bacterium
GCA_947243965.1	CAMXIQ000000000	SAMEA111528749	uncultured Muribaculaceae bacterium
GCA_947243865.1	CAMXIR000000000	SAMEA111528734	uncultured Muribaculaceae bacterium
GCA_947244265.1	CAMXJU000000000	SAMEA111528747	uncultured Muribaculaceae bacterium
GCA_947244135.1	CAMXJD000000000	SAMEA111528741	uncultured Odoribacter sp.
GCA_947243905.1	CAMXIM000000000	SAMEA111528764	uncultured Porphyromonadaceae bacterium
GCA_947243925.1	CAMXID000000000	SAMEA111528762	uncultured Porphyromonadaceae bacterium
GCA_947245165.1	CAMXMX000000000	SAMEA111528716	uncultured Porphyromonadaceae bacterium
GCA_947244295.1	CAMXJR000000000	SAMEA111528712	uncultured Porphyromonadaceae bacterium
GCA_947244165.1	CAMXJG000000000	SAMEA111528745	uncultured Porphyromonadaceae bacterium
GCA_947244145.1	CAMXJB000000000	SAMEA111528719	uncultured Porphyromonadaceae bacterium
GCA_947244205.1	CAMXIY000000000	SAMEA111528737	uncultured Porphyromonadaceae bacterium
GCA_947244975.1	CAMXMB000000000	SAMEA111528717	uncultured Porphyromonadaceae bacterium
GCA_947244105.1	CAMXJH000000000	SAMEA111528710	uncultured Porphyromonadaceae bacterium
GCA_947244215.1	CAMXJC000000000	SAMEA111528711	uncultured Porphyromonadaceae bacterium
GCA_947244285.1	CAMXJT000000000	SAMEA111528733	uncultured Porphyromonadaceae bacterium
GCA_947244155.1	CAMXIW000000000	SAMEA111528727	uncultured Porphyromonadaceae bacterium
GCA_947243835.1	CAMXIP000000000	SAMEA111528736	uncultured Porphyromonadaceae bacterium
GCA_947243815.1	CAMXIA000000000	SAMEA111528720	uncultured Porphyromonadaceae bacterium
GCA_947244025.1	CAMXIB000000000	SAMEA111528752	uncultured Prevotella sp.
GCA_947243955.1	CAMXIE000000000	SAMEA111528754	uncultured Prevotella sp.
GCA_947244935.1	CAMXMD000000000	SAMEA111528714	uncultured Prevotella sp.
GCA_947244225.1	CAMXJE000000000	SAMEA111528731	uncultured Ruminococcus sp.
GCA_947244235.1	CAMXJK000000000	SAMEA111528744	uncultured bacterium
GCA_947243845.1	CAMXIF000000000	SAMEA111528730	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA785116 data set (Metagenomic sequencing).

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