marine metagenome (ID 273799) - BioProject

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Accession: PRJNA273799 ID: 273799

marine metagenome

Baltic Sea Surface Water Metagenome

Surface water collected in the Baltic Proper, 10 km east of Öland in the Baltic Proper (N 56°55.851, E 17°03.640)

Accession	PRJNA273799
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications	Hugerth LW et al., "Metagenome-assembled genomes uncover a global brackish microbiome.", Genome Biol, 2015 Dec 14;16:279
Submission	Registration date: 6-Nov-2015 Kungliga Tekniska Hogskolan
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	33688
WGS master	83
SRA Experiments	37
Protein Sequences	110624
Publications
PubMed	1
PMC	1
Other datasets
BioSample	145
Assembly	83

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

83
83

Assembly	WGS	BioSample	Taxonomy
GCA_001437765.1	LIBH00000000	SAMN03741970	Acidimicrobiia bacterium BACL6 MAG-120322-bin79
GCA_001437785.1	LIBI00000000	SAMN03741971	Acidimicrobiia bacterium BACL6 MAG-120910-bin40
GCA_001437915.1	LIBJ00000000	SAMN03741968	Acidimicrobiia bacterium BACL6 MAG-120924-bin43
GCA_001437935.1	LIBK00000000	SAMN03741969	Acidimicrobiia bacterium BACL6 MAG-121220-bin61
GCA_001438985.1	LIAZ00000000	SAMN03741960	Acidimicrobium sp. BACL17 MAG-120823-bin42
GCA_001439005.1	LIAP00000000	SAMN03741950	Acidimicrobium sp. BACL17 MAG-120924-bin0
GCA_001438945.1	LIAQ00000000	SAMN03741951	Acidimicrobium sp. BACL19 MAG-120924-bin39
GCA_001437825.1	LIAO00000000	SAMN03741949	Acidimicrobium sp. BACL27 MAG-120823-bin4
GCA_001438925.1	LIAM00000000	SAMN03741947	Actinobacteria bacterium BACL15 MAG-120619-bin91
GCA_001437635.1	LIAN00000000	SAMN03741948	Actinobacteria bacterium BACL15 MAG-120823-bin78
GCA_001439355.1	LIDL00000000	SAMN03742024	Actinobacteria bacterium BACL2 MAG-120507-bin38
GCA_001437845.1	LIAS00000000	SAMN03741953	Actinobacteria bacterium BACL2 MAG-120802-bin41
GCA_001439025.1	LIAT00000000	SAMN03741954	Actinobacteria bacterium BACL2 MAG-120813-bin23
GCA_001437665.1	LIAU00000000	SAMN03741955	Actinobacteria bacterium BACL2 MAG-120820-bin50
GCA_001438315.1	LIBS00000000	SAMN03741993	Actinobacteria bacterium BACL2 MAG-120920-bin34
GCA_001437695.1	LIAW00000000	SAMN03741957	Actinobacteria bacterium BACL2 MAG-121001-bin67
GCA_001439035.1	LIAX00000000	SAMN03741958	Actinobacteria bacterium BACL2 MAG-121220-bin52
GCA_001439225.1	LICQ00000000	SAMN03742001	Actinobacteria bacterium BACL4 MAG-120507-bin0
GCA_001439085.1	LIBC00000000	SAMN03741963	Actinobacteria bacterium BACL4 MAG-120813-bin39
GCA_001437855.1	LIBD00000000	SAMN03741964	Actinobacteria bacterium BACL4 MAG-120820-bin23
GCA_001438395.1	LIBZ00000000	SAMN03742000	Actinobacteria bacterium BACL4 MAG-120920-bin74
GCA_001437905.1	LIBF00000000	SAMN03741966	Actinobacteria bacterium BACL4 MAG-121001-bin59
GCA_001437755.1	LIBG00000000	SAMN03741967	Actinobacteria bacterium BACL4 MAG-121022-bin9
GCA_001437955.1	LIBL00000000	SAMN03741972	Cryomorphaceae bacterium BACL11 MAG-121001-bin54
GCA_001439105.1	LIBM00000000	SAMN03741973	Cryomorphaceae bacterium BACL11 MAG-121015-bin20
GCA_001437985.1	LIBN00000000	SAMN03741974	Cryomorphaceae bacterium BACL11 MAG-121128-bin16
GCA_001438615.1	LIDF00000000	SAMN03742018	Cryomorphaceae bacterium BACL18 MAG-120507-bin74
GCA_001438015.1	LIBP00000000	SAMN03741976	Cryomorphaceae bacterium BACL18 MAG-120924-bin36
GCA_001438125.1	LICC00000000	SAMN03741977	Cryomorphaceae bacterium BACL21 MAG-121220-bin10
GCA_001439315.1	LIDG00000000	SAMN03742021	Cryomorphaceae bacterium BACL22 MAG-120619-bin32
GCA_001438165.1	LICE00000000	SAMN03741979	Cryomorphaceae bacterium BACL23 MAG-120924-bin60
GCA_001439205.1	LICI00000000	SAMN03741983	Cryomorphaceae bacterium BACL29 MAG-121220-bin8
GCA_001438205.1	LICG00000000	SAMN03741981	Cryomorphaceae bacterium BACL7 MAG-120322-bin74
GCA_001438305.1	LIBQ00000000	SAMN03741991	Cryomorphaceae bacterium BACL7 MAG-120910-bin2
GCA_001438175.1	LICF00000000	SAMN03741980	Cryomorphaceae bacterium BACL7 MAG-121220-bin83
GCA_001438385.1	LIBY00000000	SAMN03741999	Methylophilales bacterium BACL14 MAG-120910-bin43
GCA_001438645.1	LIDI00000000	SAMN03742022	Methylophilales bacterium BACL14 MAG-120920-bin58
GCA_001438965.1	LIAY00000000	SAMN03741959	Microbacteriaceae bacterium BACL25 MAG-120322-bin65
GCA_001437715.1	LIBA00000000	SAMN03741961	Microbacteriaceae bacterium BACL28 MAG-120531-bin53
GCA_001438895.1	LIAK00000000	SAMN03741945	Nitrosopumilus sp. BACL13 MAG-120910-bin56
GCA_001437625.1	LIAL00000000	SAMN03741946	Nitrosopumilus sp. BACL13 MAG-121220-bin23
GCA_001439055.1	LIBB00000000	SAMN03741962	OM182 bacterium BACL3 MAG-120507-bin80
GCA_001439345.1	LIDH00000000	SAMN03742019	OM182 bacterium BACL3 MAG-120531-bin86
GCA_001438145.1	LICD00000000	SAMN03741978	OM182 bacterium BACL3 MAG-120619-bin3
GCA_001437745.1	LIBE00000000	SAMN03741965	OM182 bacterium BACL3 MAG-120920-bin41
GCA_001439435.1	LIDJ00000000	SAMN03742023	OM182 bacterium BACL3 MAG-120924-bin41
GCA_001439505.1	LIDK00000000	SAMN03742020	OM182 bacterium BACL3 MAG-121001-bin29
GCA_001439535.1	LIDO00000000	SAMN03742027	Opitutaceae bacterium BACL24 MAG-120322-bin51
GCA_001438505.1	LICT00000000	SAMN03742009	Pelagibacteraceae bacterium BACL20 MAG-120920-bin64
GCA_001439165.1	LIBT00000000	SAMN03741994	Pelagibacteraceae bacterium BACL5 MAG-120705-bin12
GCA_001439185.1	LIBU00000000	SAMN03741995	Pelagibacteraceae bacterium BACL5 MAG-120813-bin20
GCA_001438335.1	LIBV00000000	SAMN03741996	Pelagibacteraceae bacterium BACL5 MAG-120820-bin39
GCA_001438345.1	LIBW00000000	SAMN03741997	Pelagibacteraceae bacterium BACL5 MAG-121015-bin10
GCA_001438055.1	LIBX00000000	SAMN03741998	Pelagibacteraceae bacterium BACL5 MAG-121128-bin54
GCA_001438225.1	LICJ00000000	SAMN03741986	Polaribacter sp. BACL8 MAG-120419-bin8
GCA_001439215.1	LICK00000000	SAMN03741984	Polaribacter sp. BACL8 MAG-120531-bin13
GCA_001438245.1	LICL00000000	SAMN03741985	Polaribacter sp. BACL8 MAG-120619-bin41
GCA_001439135.1	LICP00000000	SAMN03741990	Rhodobacter sp. BACL10 MAG-120419-bin15
GCA_001438235.1	LICH00000000	SAMN03741982	Rhodobacter sp. BACL10 MAG-120910-bin24
GCA_001438045.1	LIBR00000000	SAMN03741992	Rhodobacter sp. BACL10 MAG-121220-bin24
GCA_001437835.1	LIAR00000000	SAMN03741952	SAR86 cluster bacterium BACL1 MAG-120507-bin14
GCA_001438095.1	LICB00000000	SAMN03742002	SAR86 cluster bacterium BACL1 MAG-120619-bin26
GCA_001438425.1	LICR00000000	SAMN03742007	SAR86 cluster bacterium BACL1 MAG-120813-bin36
GCA_001439265.1	LICS00000000	SAMN03742003	SAR86 cluster bacterium BACL1 MAG-120820-bin45
GCA_001438465.1	LICU00000000	SAMN03742008	SAR86 cluster bacterium BACL1 MAG-120823-bin87
GCA_001438485.1	LICV00000000	SAMN03742004	SAR86 cluster bacterium BACL1 MAG-120828-bin5
GCA_001437675.1	LIAV00000000	SAMN03741956	SAR86 cluster bacterium BACL1 MAG-120920-bin57
GCA_001438545.1	LICW00000000	SAMN03742010	SAR86 cluster bacterium BACL1 MAG-120924-bin88
GCA_001439395.1	LICX00000000	SAMN03742011	SAR86 cluster bacterium BACL1 MAG-121001-bin56
GCA_001439285.1	LICY00000000	SAMN03742005	SAR86 cluster bacterium BACL1 MAG-121004-bin11
GCA_001439525.1	LICZ00000000	SAMN03742012	SAR86 cluster bacterium BACL1 MAG-121015-bin70
GCA_001438495.1	LIDA00000000	SAMN03742013	SAR86 cluster bacterium BACL1 MAG-121022-bin58
GCA_001438565.1	LIDB00000000	SAMN03742014	SAR86 cluster bacterium BACL1 MAG-121105-bin34
GCA_001438585.1	LIDC00000000	SAMN03742006	SAR86 cluster bacterium BACL1 MAG-121128-bin56
GCA_001439295.1	LIDD00000000	SAMN03742015	SAR92 bacterium BACL16 MAG-120322-bin99
GCA_001438605.1	LIDE00000000	SAMN03742016	SAR92 bacterium BACL16 MAG-120619-bin48
GCA_001438085.1	LICA00000000	SAMN03742017	SAR92 bacterium BACL26 MAG-121220-bin70
GCA_001439115.1	LICM00000000	SAMN03741987	Sphingobacteriales bacterium BACL12 MAG-120802-bin5
GCA_001438265.1	LICN00000000	SAMN03741988	Sphingobacteriales bacterium BACL12 MAG-120813-bin55
GCA_001438005.1	LIBO00000000	SAMN03741975	Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120507-bin52
GCA_001439425.1	LIDM00000000	SAMN03742025	Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120820-bin42
GCA_001439385.1	LIDN00000000	SAMN03742026	Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69
GCA_001438415.1	LICO00000000	SAMN03741989	cyanobacterium BACL30 MAG-120619-bin27

SRA Data Details

Parameter	Value
Data volume, Gbases	101
Data volume, Mbytes	41110

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marine metagenome

Baltic Sea Surface Water Metagenome

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