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Links from Protein

Accession: PRJNA253894 ID: 253894

Lacticaseibacillus rhamnosus

Lactobacillus rhamnosus variome analysis

See Genome Information for Lacticaseibacillus rhamnosus
The core genome of the Lactobacillus rhamnosus species was previously described (Douillard et. More...
AccessionPRJNA253894
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismLacticaseibacillus rhamnosus[Taxonomy ID: 47715]
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus rhamnosus
PublicationsCeapa C et al., "Correlation of Lactobacillus rhamnosus Genotypes and Carbohydrate Utilization Signatures Determined by Phenotype Profiling.", Appl Environ Microbiol, 2015 Aug 15;81(16):5458-70
SubmissionRegistration date: 1-Jul-2015
Wageningen University
RelevanceIndustrial
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)14235
WGS master46
Protein Sequences123114
Publications
PubMed1
PMC1
Other datasets
BioSample47
Assembly46
Assembly details:
Assembly levelNumber of Assemblies
46
46
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001044095.1ContigJUIN00000000SAMN03196659
Lr032
GCA_001044075.1ContigJUII00000000SAMN03196654
Lr138
GCA_001044105.1ContigJUIM00000000SAMN03196658
Lr044
GCA_001044085.1ContigJUIJ00000000SAMN03196655
Lr053
GCA_001044005.1ContigJUIO00000000SAMN03196660
Lr140
GCA_001043995.1ContigJUIK00000000SAMN03196656
Lr073
GCA_001044015.1ContigJUIL00000000SAMN03196657
Lr071
GCA_001044025.1ContigJUIH00000000SAMN03196652
Lr108
GCA_001657245.1ContigJUIS00000000SAMN03196664
Lrh45
GCA_001657255.1ContigJUIQ00000000SAMN03196662
Lrh43
GCA_001657235.1ContigJUIR00000000SAMN03196663
Lrh44
GCA_001657205.1ContigJUIP00000000SAMN03196661
Lrh42
GCA_001657195.1ContigJTIX00000000SAMN03196620
Lrh33
GCA_001657165.1ContigJTIU00000000SAMN03196618
Lrh10
GCA_001657155.1ContigJTIS00000000SAMN03196628
Lrh12
GCA_001657135.1ContigJTIR00000000SAMN03196647
Lrh13
GCA_001657115.1ContigJTIQ00000000SAMN03196644
Lrh14
GCA_001657085.1ContigJTIO00000000SAMN03196622
Lrh16
GCA_001657075.1ContigJTIN00000000SAMN03196627
Lrh17
GCA_001657055.1ContigJTIM00000000SAMN03196638
Lrh18
GCA_001657025.1ContigJTIK00000000SAMN03196626
Lrh2
GCA_001657005.1ContigJTIF00000000SAMN03196631
Lrh24
GCA_001656995.1ContigJTII00000000SAMN03196623
Lrh21
GCA_001656975.1ContigJTIE00000000SAMN03196619
Lrh25
GCA_001656945.1ContigJTIC00000000SAMN03196624
Lrh27
GCA_001656915.1ContigJTHZ00000000SAMN03196636
Lrh3
GCA_001656925.1ContigJTIB00000000SAMN03196643
Lrh28
GCA_001656895.1ContigJTHY00000000SAMN03196639
Lrh30
GCA_001656875.1ContigJTHV00000000SAMN03196634
Lrh4
GCA_001656845.1ContigJTHU00000000SAMN03196630
Lrh5
GCA_001656835.1ContigJTHT00000000SAMN03196635
Lrh6
GCA_001656815.1ContigJTHS00000000SAMN03196646
Lrh7
GCA_001656785.1ContigJTHQ00000000SAMN03196641
Lrh9
GCA_001656755.1ContigJTIV00000000SAMN03196625
Lrh1
GCA_001656765.1ContigJTIW00000000SAMN03196621
Lrh34
GCA_001656735.1ContigJTIT00000000SAMN03196637
Lrh11
GCA_001656715.1ContigJTIP00000000SAMN03196633
Lrh15
GCA_001656685.1ContigJTIL00000000SAMN03196650
Lrh19
GCA_001656675.1ContigJTIJ00000000SAMN03196645
Lrh20
GCA_001656655.1ContigJTIH00000000SAMN03196648
Lrh22
GCA_001656635.1ContigJTIG00000000SAMN03196649
Lrh23
GCA_001656605.1ContigJTID00000000SAMN03196629
Lrh26
GCA_001656585.1ContigJTIA00000000SAMN03196632
Lrh29
GCA_001656575.1ContigJTHX00000000SAMN03196651
Lrh31
GCA_001656545.1ContigJTHW00000000SAMN03196642
Lrh32
GCA_001656535.1ContigJTHR00000000SAMN03196640
Lrh8

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