Pseudomonas aeruginosa (ID 547625) - BioProject

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Accession: PRJNA547625 ID: 547625

Pseudomonas aeruginosa

Genome sequencing and assembly of Pseudomonas aeruginosa from clinical isolates

See Genome Information for Pseudomonas aeruginosa

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Genomic analysis of Pseudomonas aeruginosa isolates collected from patient samples at a health care institution in Chicago, IL

Accession	PRJNA547625
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Pseudomonas aeruginosa[Taxonomy ID: 287] Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Grants	"Pseudomonas aeruginosa Genomic Islands and Virulence" (Grant ID R01 AI075191, National Institute of Allergy and Infectious Diseases Extramural Activities) "Accessory Virulence Factors of Pseudomonas aeruginosa" (Grant ID R01 AI118257, National Institute of Allergy and Infectious Diseases Extramural Activities) "Biomarkers for Highly Virulent Pseudomonas aeruginosa Strains" (Grant ID R21 AI129167, National Institute of Allergy and Infectious Diseases Extramural Activities) "Mediators of infection in the Pseudomonas aeruginosa accessory genome" (Grant ID MRSG-13-220-01 - MPC, American Cancer Society)
Submission	Registration date: 7-Jul-2019 Northwestern University Feinberg School of Medicine
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3448
WGS master	148
Genomic DNA	4
Protein Sequences	127787
Other datasets
BioSample	149
Assembly	149

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

1
148
149

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_019168285.1	JAHTBV000000000		SAMN19947748	PA-NM-042	Pseudomonas aeruginosa
GCA_019168255.1	JAHTBQ000000000		SAMN19947743	PA-NM-037	Pseudomonas aeruginosa
GCA_019168245.1	JAHTBP000000000		SAMN19947742	PA-NM-036	Pseudomonas aeruginosa
GCA_019168205.1	JAHTCB000000000		SAMN19947754	PA-NM-048	Pseudomonas aeruginosa
GCA_019168185.1	JAHTCG000000000		SAMN19947759	PA-NM-070	Pseudomonas aeruginosa
GCA_019168215.1	JAHTCA000000000		SAMN19947753	PA-NM-047	Pseudomonas aeruginosa
GCA_019168105.1	JAHTCO000000000		SAMN19947767	PA-NM-084	Pseudomonas aeruginosa
GCA_019168165.1	JAHTCH000000000		SAMN19947760	PA-NM-071	Pseudomonas aeruginosa
GCA_019168145.1	JAHTCJ000000000		SAMN19947762	PA-NM-073	Pseudomonas aeruginosa
GCA_019168125.1	JAHTCP000000000		SAMN19947768	PA-NM-085	Pseudomonas aeruginosa
GCA_019168085.1	JAHTCU000000000		SAMN19947773	PS1732	Pseudomonas aeruginosa
GCA_019168065.1	JAHTCX000000000		SAMN19947776	PS1739	Pseudomonas aeruginosa
GCA_019168025.1	JAHTCV000000000		SAMN19947774	PS1735	Pseudomonas aeruginosa
GCA_019168035.1	JAHTDC000000000		SAMN19947781	PS1818	Pseudomonas aeruginosa
GCA_019168005.1	JAHTCW000000000		SAMN19947775	PS1736	Pseudomonas aeruginosa
GCA_019167985.1	JAHTDD000000000		SAMN19947782	PS1819	Pseudomonas aeruginosa
GCA_019167945.1	JAHTDY000000000		SAMN19947803	PS1871	Pseudomonas aeruginosa
GCA_019167935.1	JAHTDP000000000		SAMN19947794	PS1861	Pseudomonas aeruginosa
GCA_019167925.1	JAHTDQ000000000		SAMN19947795	PS1862	Pseudomonas aeruginosa
GCA_019167905.1	JAHTDW000000000		SAMN19947801	PS1869	Pseudomonas aeruginosa
GCA_019167825.1	JAHTEG000000000		SAMN19947811	PS1881	Pseudomonas aeruginosa
GCA_019167805.1	JAHTEF000000000		SAMN19947810	PS1880	Pseudomonas aeruginosa
GCA_019167775.1	JAHTEJ000000000		SAMN19947814	PS1888	Pseudomonas aeruginosa
GCA_019167765.1	JAHTEI000000000		SAMN19947813	PS1887	Pseudomonas aeruginosa
GCA_019167735.1	JAHTEL000000000		SAMN19947816	PS1894	Pseudomonas aeruginosa
GCA_019167725.1	JAHTEO000000000		SAMN19947819	PS1903	Pseudomonas aeruginosa
GCA_019167705.1	JAHTEM000000000		SAMN19947817	PS1898	Pseudomonas aeruginosa
GCA_019167865.1	JAHTEH000000000		SAMN19947812	PS1883	Pseudomonas aeruginosa
GCA_019167875.1	JAHTEE000000000		SAMN19947809	PS1879	Pseudomonas aeruginosa
GCA_019167845.1	JAHTDX000000000		SAMN19947802	PS1870	Pseudomonas aeruginosa
GCA_019166265.1	JAHTDO000000000		SAMN19947793	PS1857	Pseudomonas aeruginosa
GCA_019166275.1	JAHTCF000000000		SAMN19947758	PA-NM-068	Pseudomonas aeruginosa
GCA_019166235.1	JAHTFH000000000		SAMN19947838	PS1986	Pseudomonas aeruginosa
GCA_019166245.1	JAHTEC000000000		SAMN19947807	PS1876	Pseudomonas aeruginosa
GCA_019166225.1	JAHTDM000000000		SAMN19947791	PS1855	Pseudomonas aeruginosa
GCA_019166165.1	JAHTES000000000		SAMN19947823	PS1912	Pseudomonas aeruginosa
GCA_019166565.1	JAHTDH000000000		SAMN19947786	PS1836	Pseudomonas aeruginosa
GCA_019166545.1	JAHTBT000000000		SAMN19947746	PA-NM-040	Pseudomonas aeruginosa
GCA_019166575.1	JAHTDG000000000		SAMN19947785	PS1833	Pseudomonas aeruginosa
GCA_019166605.1	JAHTCE000000000		SAMN19947757	PA-NM-054	Pseudomonas aeruginosa
GCA_019166615.1	JAHTDB000000000		SAMN19947780	PS1775	Pseudomonas aeruginosa
GCA_019166645.1	JAHTBY000000000		SAMN19947751	PA-NM-045	Pseudomonas aeruginosa
GCA_019166705.1	JAHTFN000000000		SAMN19947844	PS1997	Pseudomonas aeruginosa
GCA_019166675.1	JAHTBR000000000		SAMN19947744	PA-NM-038	Pseudomonas aeruginosa
GCA_019166665.1	JAHTCZ000000000		SAMN19947778	PS1741	Pseudomonas aeruginosa
GCA_019166485.1	JAHTED000000000		SAMN19947808	PS1877	Pseudomonas aeruginosa
GCA_019166445.1	JAHTDT000000000		SAMN19947798	PS1866	Pseudomonas aeruginosa
GCA_019166465.1	JAHTDJ000000000		SAMN19947788	PS1851	Pseudomonas aeruginosa
GCA_019166425.1	JAHTEB000000000		SAMN19947806	PS1874	Pseudomonas aeruginosa
GCA_019166405.1	JAHTEK000000000		SAMN19947815	PS1889	Pseudomonas aeruginosa
GCA_019166525.1	JAHTCR000000000		SAMN19947770	PA-NM-090	Pseudomonas aeruginosa
GCA_019166495.1	JAHTDV000000000		SAMN19947800	PS1868	Pseudomonas aeruginosa
GCA_019166365.1	JAHTCS000000000		SAMN19947771	PA-NM-093	Pseudomonas aeruginosa
GCA_019166355.1	JAHTER000000000		SAMN19947822	PS1911	Pseudomonas aeruginosa
GCA_019166345.1	JAHTFG000000000		SAMN19947837	PS1985	Pseudomonas aeruginosa
GCA_019166325.1	JAHTFB000000000		SAMN19947832	PS1975	Pseudomonas aeruginosa
GCA_019167325.1	JAHTBU000000000		SAMN19947747	PA-NM-041	Pseudomonas aeruginosa
GCA_019167315.1	JAHTBS000000000		SAMN19947745	PA-NM-039	Pseudomonas aeruginosa
GCA_019167265.1	JAHTBZ000000000		SAMN19947752	PA-NM-046	Pseudomonas aeruginosa
GCA_019167305.1	JAHTBW000000000		SAMN19947749	PA-NM-043	Pseudomonas aeruginosa
GCA_019167285.1	JAHTBX000000000		SAMN19947750	PA-NM-044	Pseudomonas aeruginosa
GCA_019167245.1	JAHTCL000000000		SAMN19947764	PA-NM-077	Pseudomonas aeruginosa
GCA_019167485.1	JAHTFK000000000		SAMN19947841	PS1993	Pseudomonas aeruginosa
GCA_019167385.1	JAHTFS000000000		SAMN19947849	PS2011	Pseudomonas aeruginosa
GCA_019167365.1	JAHTFR000000000		SAMN19947848	PS2010	Pseudomonas aeruginosa
GCA_019167435.1	JAHTFQ000000000		SAMN19947847	PS2008	Pseudomonas aeruginosa
GCA_019167445.1	JAHTFM000000000		SAMN19947843	PS1996	Pseudomonas aeruginosa
GCA_019167415.1	JAHTFL000000000		SAMN19947842	PS1995	Pseudomonas aeruginosa
GCA_019167405.1	JAHTEY000000000		SAMN19947829	PS1957	Pseudomonas aeruginosa
GCA_019167645.1	JAHTEX000000000		SAMN19947828	PS1956	Pseudomonas aeruginosa
GCA_019167665.1	JAHTET000000000		SAMN19947824	PS1915	Pseudomonas aeruginosa
GCA_019167585.1	JAHTFJ000000000		SAMN19947840	PS1991	Pseudomonas aeruginosa
GCA_019167565.1	JAHTFE000000000		SAMN19947835	PS1982	Pseudomonas aeruginosa
GCA_019167535.1	JAHTFD000000000		SAMN19947834	PS1981	Pseudomonas aeruginosa
GCA_019167525.1	JAHTFF000000000		SAMN19947836	PS1984	Pseudomonas aeruginosa
GCA_019167505.1	JAHTFA000000000		SAMN19947831	PS1972	Pseudomonas aeruginosa
GCA_019167595.1	JAHTFC000000000		SAMN19947833	PS1976	Pseudomonas aeruginosa
GCA_019167625.1	JAHTEW000000000		SAMN19947827	PS1952	Pseudomonas aeruginosa
GCA_019167685.1	JAHTEV000000000		SAMN19947826	PS1922	Pseudomonas aeruginosa
GCA_019166985.1	JAHTCY000000000		SAMN19947777	PS1740	Pseudomonas aeruginosa
GCA_019166995.1	JAHTDL000000000		SAMN19947790	PS1854	Pseudomonas aeruginosa
GCA_019167005.1	JAHTDF000000000		SAMN19947784	PS1832	Pseudomonas aeruginosa
GCA_019167045.1	JAHTDI000000000		SAMN19947787	PS1849	Pseudomonas aeruginosa
GCA_019167085.1	JAHTCT000000000		SAMN19947772	PA-NM-094	Pseudomonas aeruginosa
GCA_019167065.1	JAHTDA000000000		SAMN19947779	PS1757	Pseudomonas aeruginosa
GCA_019167205.1	JAHTCD000000000		SAMN19947756	PA-NM-050	Pseudomonas aeruginosa
GCA_019167215.1	JAHTCM000000000		SAMN19947765	PA-NM-082	Pseudomonas aeruginosa
GCA_019167185.1	JAHTCI000000000		SAMN19947761	PA-NM-072	Pseudomonas aeruginosa
GCA_019167165.1	JAHTCK000000000		SAMN19947763	PA-NM-075	Pseudomonas aeruginosa
GCA_019167125.1	JAHTCC000000000		SAMN19947755	PA-NM-049	Pseudomonas aeruginosa
GCA_019167115.1	JAHTCQ000000000		SAMN19947769	PA-NM-089	Pseudomonas aeruginosa
GCA_019167105.1	JAHTCN000000000		SAMN19947766	PA-NM-083	Pseudomonas aeruginosa
GCA_019166885.1	JAHTDU000000000		SAMN19947799	PS1867	Pseudomonas aeruginosa
GCA_019166725.1	JAHTFO000000000		SAMN19947845	PS2004	Pseudomonas aeruginosa
GCA_019166785.1	JAHTFI000000000		SAMN19947839	PS1987	Pseudomonas aeruginosa
GCA_019166795.1	JAHTEZ000000000		SAMN19947830	PS1961	Pseudomonas aeruginosa
GCA_019166765.1	JAHTEQ000000000		SAMN19947821	PS1907	Pseudomonas aeruginosa
GCA_019166745.1	JAHTFP000000000		SAMN19947846	PS2007	Pseudomonas aeruginosa
GCA_019166865.1	JAHTDE000000000		SAMN19947783	PS1831	Pseudomonas aeruginosa
GCA_019166845.1	JAHTDZ000000000		SAMN19947804	PS1872	Pseudomonas aeruginosa
GCA_019166825.1	JAHTEA000000000		SAMN19947805	PS1873	Pseudomonas aeruginosa
GCA_019166965.1	JAHTDN000000000		SAMN19947792	PS1856	Pseudomonas aeruginosa
GCA_019166935.1	JAHTDK000000000		SAMN19947789	PS1853	Pseudomonas aeruginosa
GCA_019166915.1	JAHTDR000000000		SAMN19947796	PS1863	Pseudomonas aeruginosa
GCA_019166905.1	JAHTDS000000000		SAMN19947797	PS1864	Pseudomonas aeruginosa
GCA_019165125.1	JAHTGK000000000		SAMN19947867	PS2045	Pseudomonas aeruginosa
GCA_019165095.1	JAHTGN000000000		SAMN19947870	PS2050	Pseudomonas aeruginosa
GCA_019165185.1	JAHTGO000000000		SAMN19947871	PS2052	Pseudomonas aeruginosa
GCA_019165155.1	JAHTGJ000000000		SAMN19947866	PS2035	Pseudomonas aeruginosa
GCA_019165145.1	JAHTGF000000000		SAMN19947862	PS2029	Pseudomonas aeruginosa
GCA_019165015.1	JAHTFY000000000		SAMN19947855	PS2018	Pseudomonas aeruginosa
GCA_019165025.1	JAHTGE000000000		SAMN19947861	PS2028	Pseudomonas aeruginosa
GCA_019165005.1	JAHTGL000000000		SAMN19947868	PS2046	Pseudomonas aeruginosa
GCA_019165285.1	JAHTFZ000000000		SAMN19947856	PS2019	Pseudomonas aeruginosa
GCA_019165265.1	JAHTGA000000000		SAMN19947857	PS2021	Pseudomonas aeruginosa
GCA_019165065.1	JAHTGM000000000		SAMN19947869	PS2047	Pseudomonas aeruginosa
GCA_019165235.1	JAHTFX000000000		SAMN19947854	PS2016	Pseudomonas aeruginosa
GCA_019165225.1	JAHTGB000000000		SAMN19947858	PS2024	Pseudomonas aeruginosa
GCA_019165205.1	JAHTGD000000000		SAMN19947860	PS2026	Pseudomonas aeruginosa
GCA_019165325.1	JAHTFV000000000		SAMN19947852	PS2014	Pseudomonas aeruginosa
GCA_019165305.1	JAHTFW000000000		SAMN19947853	PS2015	Pseudomonas aeruginosa
GCA_019165385.1	JAHTGG000000000		SAMN19947863	PS2031	Pseudomonas aeruginosa
GCA_019165405.1	JAHTGI000000000		SAMN19947865	PS2034	Pseudomonas aeruginosa
GCA_019165365.1	JAHTFU000000000		SAMN19947851	PS2013	Pseudomonas aeruginosa
GCA_019165345.1	JAHTFT000000000		SAMN19947850	PS2012	Pseudomonas aeruginosa
GCA_019165425.1	JAHTGH000000000		SAMN19947864	PS2033	Pseudomonas aeruginosa
GCA_019165525.1	JAHTGC000000000		SAMN19947859	PS2025	Pseudomonas aeruginosa
GCA_019166025.1	JAHTEU000000000		SAMN19947825	PS1921	Pseudomonas aeruginosa
GCA_019166005.1	JAHTEP000000000		SAMN19947820	PS1906	Pseudomonas aeruginosa
GCA_019165985.1	JAHTEN000000000		SAMN19947818	PS1901	Pseudomonas aeruginosa
GCA_006704595.2		4	SAMN12162657	PS1793	Pseudomonas aeruginosa
GCA_006704275.1	VIHC00000000		SAMN12162672	PA-NM-069	Pseudomonas aeruginosa
GCA_006704285.1	VIHB00000000		SAMN12162673	PA-NM-074	Pseudomonas aeruginosa
GCA_006704255.1	VIHA00000000		SAMN12162674	PA-NM-079	Pseudomonas aeruginosa
GCA_006704245.1	VIGZ00000000		SAMN12162675	PA-NM-088	Pseudomonas aeruginosa
GCA_006704555.1	VIHO00000000		SAMN12162660	PS1875	Pseudomonas aeruginosa
GCA_006704565.1	VIHP00000000		SAMN12162659	PS1797	Pseudomonas aeruginosa
GCA_006704575.1	VIHQ00000000		SAMN12162658	PS1796	Pseudomonas aeruginosa
GCA_006704495.1	VIHJ00000000		SAMN12162665	PS1934	Pseudomonas aeruginosa
GCA_006704545.1	VIHN00000000		SAMN12162661	PS1882	Pseudomonas aeruginosa
GCA_006704475.1	VIHL00000000		SAMN12162663	PS1893	Pseudomonas aeruginosa
GCA_006704485.1	VIHM00000000		SAMN12162662	PS1884	Pseudomonas aeruginosa
GCA_006704465.1	VIHK00000000		SAMN12162664	PS1900	Pseudomonas aeruginosa
GCA_006704445.1	VIHI00000000		SAMN12162666	PS1946	Pseudomonas aeruginosa
GCA_006704385.1	VIHG00000000		SAMN12162668	PS1955	Pseudomonas aeruginosa
GCA_006704375.1	VIHE00000000		SAMN12162670	PS2027	Pseudomonas aeruginosa
GCA_006704365.1	VIHH00000000		SAMN12162667	PS1948	Pseudomonas aeruginosa
GCA_006704355.1	VIHD00000000		SAMN12162671	PA-NM-015	Pseudomonas aeruginosa
GCA_006704345.1	VIHF00000000		SAMN12162669	PS1977	Pseudomonas aeruginosa

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Pseudomonas aeruginosa

Genome sequencing and assembly of Pseudomonas aeruginosa from clinical isolates

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