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Accession: PRJNA855487 ID: 855487

Hybrid assemblies of Streptococcus suis isolates from transcriptomic study

These Illumina-Nanopore assemblies were constructed for a transcriptomic study on Streptococcus suis strains. More...

Accession	PRJNA855487
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Fredriksen S et al., "Transcriptomics in serum and culture medium reveal shared and differential gene regulation in pathogenic and commensal Streptococcus suis", Microbial Genomics, 2023;9(4)
Submission	Registration date: 4-Jul-2022 Wageningen University & Research
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	29
WGS master	2
Genomic DNA	27
Protein Sequences	34793
Other datasets
BioSample	19
Assembly	18

Assembly details:

Assembly level

Number of Assemblies

Complete genome

Complete genome

Contig

16
2
18

Assembly	Level	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_029069185.1		JAREIM000000000		SAMN29938213	27RC1	Streptococcus suis
GCA_024582755.1			1	SAMN29938211	12RC1	Streptococcus suis
GCA_024583135.1			1	SAMN30065792	SS15055_N2_C15	Streptococcus suis
GCA_024583115.1			2	SAMN30065793	DNS11	Streptococcus suis
GCA_024583095.1			3	SAMN30065794	DNC13	Streptococcus suis
GCA_024583075.1			1	SAMN30065795	DNC15	Streptococcus suis
GCA_024583055.1			3	SAMN30065796	DNS20	Streptococcus suis
GCA_024583035.1			2	SAMN30065798	DNR48	Streptococcus suis
GCA_024583015.1			2	SAMN30065797	DNR43	Streptococcus suis
GCA_024582995.1			2	SAMN30065800	M102942_S11	Streptococcus suis
GCA_024582975.1			1	SAMN30065802	M105052_S26	Streptococcus suis
GCA_024582955.1			1	SAMN30065801	M104300_S20	Streptococcus suis
GCA_024582935.1			1	SAMN30065803	M106471_S40	Streptococcus suis
GCA_024582915.1			1	SAMN30065799	DNC49	Streptococcus suis
GCA_024753125.1		JANUHD000000000		SAMN30065789	M101999_C1	Streptococcus suis
GCA_024220135.1			3	SAMN02603633	T15	Streptococcus suis T15
GCA_024220115.1			1	SAMN14932654	LSS42	Streptococcus suis
GCA_024220075.1			1	SAMN14932458	1521251	Streptococcus suis

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