ID 743218 - BioProject

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Accession: PRJNA743218 ID: 743218

CeMbio43 Microbial Genomes and Sequencing Reads

Here we introduce the CeMbio43 community, an extended natural microbiota for the nematode Caenorhabditis elegans based on former meta-analysis of the natural microbiome of this nematode (10. More...

Accession	PRJNA743218
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 2-Jul-2021 Christian-Albrechts-University Kiel
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	43
WGS master	34
Genomic DNA	9
SRA Experiments	220
Protein Sequences	44292
Other datasets
BioSample	265
Assembly	43

Assembly details:

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Assembly level

Number of Assemblies

9
18
16
43

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_037479435.1	JBBGZB000000000		SAMN38840196	MYb10	Acinetobacter guillouiae
GCA_037479255.1	JBBGZJ000000000		SAMN38840206	MYb158	Acinetobacter johnsonii
GCA_037479235.1	JBBGZM000000000		SAMN38840209	MYb177	Acinetobacter sp. MYb177
GCA_037572605.1	JBBGZP000000000		SAMN38840212	MYb191	Acinetobacter sp. MYb191
GCA_037479295.1	JBBGZE000000000		SAMN38840200	MYb49	Brucella anthropi
GCA_037479275.1	JBBGZF000000000		SAMN38840201	MYb58	Brucella pseudogrignonensis
GCA_037479375.1	JBBGZD000000000		SAMN38840199	MYb25	Chryseobacterium culicis
GCA_035974195.1		1	SAMN38840235	JUb44	Chryseobacterium scophthalmum
GCA_035974275.1		1	SAMN38840215	MYb264	Chryseobacterium sp. MYb264
GCA_037572595.1	JBBGZQ000000000		SAMN38840216	MYb328	Chryseobacterium sp. MYb328
GCA_035974295.1		1	SAMN38840233	BIGb0172	Comamonas piscis
GCA_037479395.1	JBBGZC000000000		SAMN38840198	MYb21	Comamonas sp. MYb21
GCA_037479555.1	JBBGYU000000000		SAMN38840224	MYb396	Comamonas sp. MYb396
GCA_037479315.1	JBBGZG000000000		SAMN38840202	MYb69	Comamonas sp. MYb69
GCA_037572515.1	JBBGZK000000000		SAMN38840207	MYb174	Enterobacter ludwigii
GCA_037572455.1	JBBGZL000000000		SAMN38840208	MYb176	Enterobacter ludwigii
GCA_037479215.1	JBBGZO000000000		SAMN38840211	MYb186	Enterobacter sp. MYb186
GCA_037479335.1	JBBGZI000000000		SAMN38840205	MYb121	Erwinia billingiae
GCA_037479175.1	JBBGZS000000000		SAMN38840220	MYb375	Erwinia sp. MYb375
GCA_037479575.1	JBBGYT000000000		SAMN38840226	MYb416	Erwinia sp. MYb416
GCA_037479155.1	JBBGZV000000000		SAMN38840227	MYb535	Erwinia sp. MYb535
GCA_037479615.1	JBBGYQ000000000		SAMN38840238	MYb596	Gluconobacter albidus
GCA_037479075.1	JBBGZX000000000		SAMN38840237	MYb595	Gluconobacter cerinus
GCA_037479635.1	JBBGYR000000000		SAMN38840236	MYb592	Gluconobacter wancherniae
GCA_035974235.1		1	SAMN38840229	JUb66	Lelliottia amnigena
GCA_037479515.1	JBBGYW000000000		SAMN38840221	MYb379	Ochrobactrum sp. MYb379
GCA_037479355.1	JBBGZH000000000		SAMN38840203	MYb71	Ochrobactrum vermis
GCA_037479095.1	JBBGZW000000000		SAMN38840230	BIGb0393	Pantoea nemavictus
GCA_035974315.1		1	SAMN38840214	MSPm1	Pseudomonas berkeleyensis
GCA_035974255.1		1	SAMN38840204	MYb115	Pseudomonas fluorescens
GCA_019212185.1		1	SAMN20014182	MYb115	Pseudomonas fluorescens
GCA_035974175.1		1	SAMN38840197	MYb11	Pseudomonas lurida
GCA_037479475.1	JBBGYY000000000		SAMN38840217	MYb330	Pseudomonas sp. MYb330
GCA_037479195.1	JBBGZR000000000		SAMN38840218	MYb331	Pseudomonas sp. MYb331
GCA_037479495.1	JBBGYX000000000		SAMN38840219	MYb371	Pseudomonas sp. MYb371
GCA_037479135.1	JBBGZU000000000		SAMN38840225	MYb398	Pseudomonas sp. MYb398
GCA_037479595.1	JBBGYS000000000		SAMN38840228	MYb541	Pseudomonas sp. MYb541
GCA_037572635.1	JBBGZN000000000		SAMN38840210	MYb181	Sphingobacterium faecium
GCA_035974215.1		1	SAMN38840234	BIGb0170	Sphingobacterium paramultivorum
GCA_037572665.1	JBBGZT000000000		SAMN38840222	MYb382	Sphingobacterium sp. MYb382
GCA_037479535.1	JBBGYV000000000		SAMN38840223	MYb388	Sphingobacterium sp. MYb388
GCA_037479455.1	JBBGZA000000000		SAMN38840231	JUb134	Sphingomonas molluscorum
GCA_037479415.1	JBBGYZ000000000		SAMN38840232	JUb19	Stenotrophomonas indicatrix

SRA Data Details

Parameter	Value
Data volume, Gbases	52
Data volume, Mbytes	24228

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CeMbio43 Microbial Genomes and Sequencing Reads

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