Enterobacteriaceae (ID 273275) - BioProject

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Accession: PRJNA273275 ID: 273275

Enterobacteriaceae

GeneSippr

See Genome Information for Escherichia coli

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8907 additional projects are related by organism.

Genome assemblies of Escherichia coli and Enterobacter cloacae strains processed with the GeneSippr pipeline

Accession	PRJNA273275
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Enterobacteriaceae[Taxonomy ID: 543] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
Publications	Lambert D et al., "GeneSippr: a rapid whole-genome approach for the identification and characterization of foodborne pathogens such as priority Shiga toxigenic Escherichia coli.", PLoS One, 2015;10(4):e0122928
Submission	Registration date: 24-Feb-2015 Canadian Food Inspection Agency
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	8324
WGS master	28
SRA Experiments	28
Publications
PubMed	1
PMC	1
Other datasets
BioSample	28
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

28
28

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_000948685.1	JXWK00000000	SAMN03292329	OLC-1682	Enterobacter ludwigii
GCA_000948705.1	JXWL00000000	SAMN03292330	OLC-1683	Enterobacter ludwigii
GCA_000932215.1	JXWM00000000	SAMN03317014	OLC-683	Escherichia coli
GCA_000948675.1	JXVP00000000	SAMN03292328	OLC-1555	Escherichia coli
GCA_000948595.1	JXWB00000000	SAMN03292342	OLC-728	Escherichia coli
GCA_000948625.1	JXVO00000000	SAMN03292327	OLC-1547	Escherichia coli
GCA_000948605.1	JXVM00000000	SAMN03292325	OLC-1051	Escherichia coli
GCA_000948615.1	JXVN00000000	SAMN03292326	OLC-1470	Escherichia coli
GCA_000948555.1	JXVZ00000000	SAMN03292340	OLC-716	Escherichia coli
GCA_000948565.1	JXWA00000000	SAMN03292341	OLC-721	Escherichia coli
GCA_000948535.1	JXVY00000000	SAMN03292339	OLC-715	Escherichia coli
GCA_000948475.1	JXVV00000000	SAMN03292336	OLC-682	Escherichia coli
GCA_000948515.1	JXVX00000000	SAMN03292338	OLC-710	Escherichia coli
GCA_000948465.1	JXVW00000000	SAMN03292337	OLC-684	Escherichia coli
GCA_000948445.1	JXVL00000000	SAMN03292324	EDL933	Escherichia coli O157:H7 str. EDL933
GCA_000948435.1	JXVU00000000	SAMN03292335	OLC-679	Escherichia coli
GCA_000948955.1	JXWJ00000000	SAMN03292350	Sakai	Escherichia coli
GCA_000948875.1	JXWF00000000	SAMN03292346	OLC-791	Escherichia coli
GCA_000948885.1	JXWH00000000	SAMN03292348	OLC-816	Escherichia coli
GCA_000948895.1	JXWG00000000	SAMN03292347	OLC-797	Escherichia coli
GCA_000948905.1	JXWI00000000	SAMN03292349	OLC-975	Escherichia coli
GCA_000948815.1	JXWC00000000	SAMN03292343	OLC-731	Escherichia coli
GCA_000948825.1	JXWD00000000	SAMN03292344	OLC-732	Escherichia coli
GCA_000948835.1	JXWE00000000	SAMN03292345	OLC-733	Escherichia coli
GCA_000948785.1	JXVT00000000	SAMN03292334	OLC-675	Escherichia coli
GCA_000948765.1	JXVS00000000	SAMN03292333	OLC-469	Escherichia coli
GCA_000948745.1	JXVR00000000	SAMN03292332	OLC-464	Escherichia coli
GCA_000948715.1	JXVQ00000000	SAMN03292331	OLC-455	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	17
Data volume, Mbytes	11330

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