Lacticaseibacillus (ID 908878) - BioProject

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Accession: PRJNA908878 ID: 908878

Lacticaseibacillus

Lacticaseibacillus species isolates from clinical specimens and commercial products.

Whole genome sequencing of Lacticaseibacillus species with clinical relevance.

Accession	PRJNA908878
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Patient-Oriented Research on Pseudomonas aeruginosa" (Grant ID K24 AI104831, National Institute of Allergy and Infectious Diseases Extramural Activities) "Population Analysis of Pseudomonas aeruginosa Virulence" (Grant ID R01 AI118257, National Institute of Allergy and Infectious Diseases Extramural Activities) "Dynamics of Pseudomonas aeruginosa During Bacteremia" (Grant ID R21 AI153953, National Institute of Allergy and Infectious Diseases Extramural Activities) "High-Risk Clones of Pseudomonas aeruginosa" (Grant ID R21 AI164254, National Institute of Allergy and Infectious Diseases Extramural Activities) "Successful Clinical Response In Pneumonia Therapy (SCRIPT) Systems Biology Center" (Grant ID U19 AI135964, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 5-Dec-2022 Northwestern University Feinberg School of Medicine
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	23
SRA Experiments	23
Other datasets
BioSample	23
Assembly	23

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

23
23

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_026967295.1	JAPUDG000000000	SAMN32062175	Lpc_yogurt_B2	Lacticaseibacillus paracasei
GCA_026967275.1	JAPUDF000000000	SAMN32062176	Lpc_yogurt_B3	Lacticaseibacillus paracasei
GCA_026967245.1	JAPUDC000000000	SAMN32062179	Lpc_yogurt_B6	Lacticaseibacillus paracasei
GCA_026967235.1	JAPUDB000000000	SAMN32062180	Lpc_yogurt_C1	Lacticaseibacillus paracasei
GCA_026967205.1	JAPUDE000000000	SAMN32062177	Lpc_yogurt_B4	Lacticaseibacillus paracasei
GCA_026967195.1	JAPUDD000000000	SAMN32062178	Lpc_yogurt_B5	Lacticaseibacillus paracasei
GCA_026967175.1	JAPUCZ000000000	SAMN32062182	Lpc_yogurt_C3	Lacticaseibacillus paracasei
GCA_026967095.1	JAPUCX000000000	SAMN32062184	Lpc_yogurt_C5	Lacticaseibacillus paracasei
GCA_026967105.1	JAPUDA000000000	SAMN32062181	Lrh_yogurt_C2	Lacticaseibacillus rhamnosus
GCA_026967075.1	JAPUCV000000000	SAMN32062186	Lrh_yogurt_D1	Lacticaseibacillus rhamnosus
GCA_026967035.1	JAPUCU000000000	SAMN32062187	Lrh_yogurt_D2	Lacticaseibacillus rhamnosus
GCA_026967025.1	JAPUCT000000000	SAMN32062188	Lrh_yogurt_D3	Lacticaseibacillus rhamnosus
GCA_026967015.1	JAPUCR000000000	SAMN32062190	Lrh_yogurt_D5	Lacticaseibacillus rhamnosus
GCA_026966995.1	JAPUCS000000000	SAMN32062189	Lrh_yogurt_D4	Lacticaseibacillus rhamnosus
GCA_026966975.1	JAPUCQ000000000	SAMN32062191	Lrh_yogurt_D6	Lacticaseibacillus rhamnosus
GCA_026967395.1	JAPUDL000000000	SAMN32062170	Lrh_yogurt_A1	Lacticaseibacillus rhamnosus
GCA_026967405.1	JAPUDM000000000	SAMN32062169	Lrh_blood001	Lacticaseibacillus rhamnosus
GCA_026967345.1	JAPUDK000000000	SAMN32062171	Lrh_yogurt_A2	Lacticaseibacillus rhamnosus
GCA_026967355.1	JAPUDJ000000000	SAMN32062172	Lrh_yogurt_A4	Lacticaseibacillus rhamnosus
GCA_026967335.1	JAPUDH000000000	SAMN32062174	Lrh_yogurt_A6	Lacticaseibacillus rhamnosus
GCA_026967315.1	JAPUDI000000000	SAMN32062173	Lrh_yogurt_A5	Lacticaseibacillus rhamnosus
GCA_026967135.1	JAPUCW000000000	SAMN32062185	Lrh_yogurt_C6	Lacticaseibacillus rhamnosus
GCA_026967125.1	JAPUCY000000000	SAMN32062183	Lrh_yogurt_C4	Lacticaseibacillus rhamnosus

SRA Data Details

Parameter	Value
Data volume, Gbases	6
Data volume, Mbytes	4204

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Lacticaseibacillus

Lacticaseibacillus species isolates from clinical specimens and commercial products.

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