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BioSample

National Center for Biotechnology Information

Identifiers: BioSample: SAMN00001472; Sample name: BCM-HMP0049; SRA: SRS001937

Organism: Lactobacillus johnsonii ATCC 33200
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus johnsonii

Attributes

strain	ATCC 33200
estimated size	1773000
culture collection	ATCC:33200
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	ATCC 33200, DSM 10533
project name	Lactobacillus johnsonii ATCC 33200
isolation source	missing
misc_param: HMP supersite	urogenital_tract
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 5: Non-contiguous Finished103.24x;52
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX, Illumina, Sanger
assembly	Newbler v. 1.1.03.24
misc_param: HMP body site	not determined
type-material	type strain of Lactobacillus johnsonii